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See other B4GALNT4 CNV Assays ›
Gene Symbol
B4GALNT4
Assay Reference Genome
Location

Chr.11:379693 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00233109_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 338707

Gene Name:

 beta-1,4-N-acetyl-galactosaminyltransferase 4

Gene Aliases:

 -

Location:

 Chr.11:369773-382117 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 16 - Intron 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
B4GALNT4 NM_178537.4 NP_848632.2
XM_017017654.1 XP_016873143.1
AB089939.1 BAD06471.1
AK057774.1 BAB71566.1
BC131528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss PTDSS2 PHRF1 PGGHG IFITM1 IRF7 SIGIRR CDHR5 HRAS LOC101059906 LRRC56 RNH1 LMNTD2 ANO9 B4GALNT4 RASSF7 LOC143666 PKP3 MIR210 IFITM5 IFITM3 MIR210HG IFITM2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss DEAF1 PTDSS2 PHRF1 PDDC1 MIR6744 LOC171391 TALDO1 HRAS MUC5B CEND1 LRRC56 PANO1 PIDD1 RPLP2 B4GALNT4 SCT RASSF7 LOC143666 PKP3 CHID1 MUC2 SLC25A22 SNORA52 TSPAN4 AP2A2 IRF7 SIGIRR CDHR5 MUC5AC CD151 MUC6 LOC101059906 RNH1 LMNTD2 TOLLIP CRACR2B ANO9 LOC101927503 DRD4 TMEM80 EPS8L2 PNPLA2 POLR2L MIR210 MIR210HG
nsv552776 Chr.11:366710 - 432436 on Build GRCh38 Loss PKP3 SIGIRR ANO9 B4GALNT4
esv28392 Chr.11:363975 - 403432 on Build GRCh38 Gain+Loss PKP3 B4GALNT4
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion PTDSS2 PKP3 SIGIRR RNH1 ANO9 B4GALNT4
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain PKP3 SIGIRR ANO9 B4GALNT4
dgv1505n54 Chr.11:198510 - 470331 on Build GRCh38 Gain PTDSS2 ODF3 SIRT3 MIR6743 PGGHG IFITM1 SIGIRR RIC8A ANO9 B4GALNT4 NLRP6 PSMD13 PKP3 BET1L IFITM5 IFITM3 IFITM2
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion PTDSS2 PKP3 SIGIRR ANO9 B4GALNT4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion DEAF1 PTDSS2 PHRF1 PDDC1 LOC171391 TALDO1 HRAS CEND1 LRRC56 PANO1 PIDD1 RPLP2 B4GALNT4 SCT RASSF7 LOC143666 PKP3 CHID1 SLC25A22 SNORA52 TSPAN4 AP2A2 IRF7 SIGIRR CDHR5 CD151 LOC101059906 RNH1 LMNTD2 CRACR2B ANO9 DRD4 TMEM80 EPS8L2 PNPLA2 POLR2L MIR210 MIR210HG
dgv1507n54 Chr.11:368778 - 382912 on Build GRCh38 Loss B4GALNT4

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)


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