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See other TRIM28 CNV Assays ›
Gene Symbol
TRIM28
Assay Reference Genome
Location

Chr.19:58550191 on build GRCh38
Cytoband
19q13.43
Assay ID Hs00236041_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10155

Gene Name:

 tripartite motif containing 28

Gene Aliases:

 KAP1, PPP1R157, RNF96, TF1B, TIF1B

Location:

 Chr.19:58544469-58550715 on Build GRCh38

Assay Gene Location:

 Within Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRIM28 NM_005762.2 16 2527 NP_005753.1
AK131063.1 9 1115
AK225760.1 16 2527
AK313478.1 16 2244
AL360114.1 4 353
AL360188.1 4 434
AL360189.1 4 314
BC004978.1 16 2527 AAH04978.1
BC007390.2 5 844 AAH07390.2
BC052986.2 14 2278 AAH52986.1
U31657.1 5 783 AAA74954.1
U78773.1 16 2338 AAB37341.1
U95040.1 16 2494 AAB51517.1
X97548.1 16 2599 CAA66150.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1057206 Chr.19:58546716 - 58586475 on Build GRCh38 Gain CENPBD1P1 TRIM28 CHMP2A MZF1 MIR6807 UBE2M MZF1-AS1
dgv3687n100 Chr.19:58473466 - 58586475 on Build GRCh38 Gain ZNF324 CENPBD1P1 ZNF446 TRIM28 CHMP2A MZF1 ZBTB45 MIR6807 SLC27A5 UBE2M MZF1-AS1
nsv515731 Chr.19:58320453 - 58576112 on Build GRCh38 Gain+Loss ZNF837 ZNF324 RNF225 ZNF446 LOC105372483 TRIM28 CHMP2A ZNF132 CENPBD1P1 A1BG LOC100419840 MIR4754 MIR6806 ZNF584 RPS5 LOC100506634 MZF1 ZNF324B MZF1-AS1 A1BG-AS1 ZSCAN22 ZNF497 ZBTB45 MIR6807 SLC27A5 UBE2M
nsv952156 Chr.19:58466134 - 58600733 on Build GRCh38 Deletion ZNF324 CENPBD1P1 ZNF446 TRIM28 CHMP2A MZF1 ZBTB45 MIR6807 SLC27A5 UBE2M MZF1-AS1
nsv1160670 Chr.19:58433008 - 58586487 on Build GRCh38 Deletion ZNF324 ZNF446 TRIM28 CHMP2A MZF1 ZNF324B ZNF132 MZF1-AS1 CENPBD1P1 ZBTB45 MIR6807 SLC27A5 UBE2M
nsv828657 Chr.19:58483484 - 58585740 on Build GRCh38 Gain CENPBD1P1 ZNF446 TRIM28 CHMP2A MZF1 ZBTB45 MIR6807 SLC27A5 UBE2M MZF1-AS1
dgv3688n100 Chr.19:58506055 - 58586475 on Build GRCh38 Gain CENPBD1P1 TRIM28 CHMP2A MZF1 ZBTB45 MIR6807 SLC27A5 UBE2M MZF1-AS1
nsv1057077 Chr.19:58411953 - 58586475 on Build GRCh38 Gain ZNF324 ZNF446 TRIM28 CHMP2A MZF1 ZNF324B ZNF132 MZF1-AS1 CENPBD1P1 ZNF584 ZBTB45 MIR6807 SLC27A5 UBE2M

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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