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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49691243 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00266837_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 1 136 NP_001129524.1
NM_001199752.2 1 136 NP_001186681.1
NM_001199753.1 1 136 NP_001186682.1
NM_152359.2 1 136 NP_689572.1
NR_108072.1 1 136
XM_005258505.2 1 132 XP_005258562.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 1 145 XP_011524742.1
XM_017026265.1 1 128 XP_016881754.1
XM_017026266.1 1 146 XP_016881755.1
XM_017026267.1 1 135 XP_016881756.1
XM_017026272.1 1 108 XP_016881761.1
XM_017026273.1 1 116 XP_016881762.1
AF357970.1 1 94 AAL99615.1
AK096516.1 1 132
AK289713.1 1 128
AK290092.1 1 108
AK309087.1 1 128
BC029104.1 1 100 AAH29104.1
BP194020.1 1 136
DB456457.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss PRR12 RRAS PRRG2 NOSIP PRMT1 IRF3 BCL2L12 SCAF1 MIR5088 CPT1C ADM5
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss PRR12 RRAS PRRG2 NOSIP PRMT1 IRF3 BCL2L12 SCAF1 MIR5088 CPT1C ADM5
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss IZUMO1 SNAR-C5 SNAR-C1 SNAR-G1 KDELR1 CYTH2 SNAR-A13 MIR6800 CCDC114 TSKS HRC SNAR-A8 FUZ MIR4750 MIR4749 LOC105372430 SNAR-A4 SNAR-B1 SNAR-A2 SNAR-A7 NOSIP SNAR-A9 CGB5 FAM83E CABP5 PTOV1-AS2 GFY CGB7 ADM5 SNAR-A14 SNORD33 EMP3 LOC101059948 BAX MED25 C19orf68 DKKL1 PNKP MIR6798 HSD17B14 MAMSTR PIH1D1 SPACA4 TBC1D17 AP2A1 CGB3 SNORD32A GRIN2D SNORD34 PLA2G4C PPP1R15A CGB8 FCGRT CARD8-AS1 SNAR-C2 SNAR-A3 RRAS RPL18 VRK3 FLT3LG BSPH1 MIR4751 LOC101928295 MIR4324 CGB1 KCNJ14 BCAT2 IL4I1 MIR6799 SULT2B1 NUCB1 CARD8 SCAF1 SNAR-B2 CCDC155 ZNF473 SNAR-A12 MIR5088 LHB C19orf73 SLC6A16 PRR12 SIGLEC11 TEAD2 SNAR-G2 RCN3 SYNGR4 SNORD35B SNAR-C4 SEC1P PTH2 CGB2 GRWD1 SNAR-A10 LIG1 PRRG2 DBP AKT1S1 SNRNP70 NTF4 IRF3 SNORD35A RPS11 LOC100287477 SNAR-A6 ZNF114 SLC17A7 TRPM4 FTL CA11 NTN5 MIR150 NUP62 SNAR-D RASIP1 PLA2G4C-AS1 BCL2L12 PTOV1-AS1 PPFIA3 SNAR-A5 SIGLEC16 PLEKHA4 SNAR-A1 FUT1 CPT1C ATF5 FLJ26850 KCNA7 LIN7B TULP2 RUVBL2 PRMT1 GYS1 PTOV1 SPHK2 SNAR-C3 SNAR-A11 TMEM143 CD37 ELSPBP1 LOC105447645 FUT2 DHDH LMTK3 RPL13A FGF21 NUCB1-AS1 ALDH16A1
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain PRR12 RRAS PRMT1 IRF3 BCL2L12 SCAF1 MIR5088 CPT1C ADM5
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion PNKP PRRG2 AKT1S1 IRF3 MIR6800 TBC1D17 SCAF1 AP2A1 TSKS NUP62 FUZ BCL2L12 PTOV1-AS1 MIR4750 MIR5088 MIR4749 CPT1C ATF5 PRR12 RRAS NOSIP PRMT1 PTOV1 MIR4751 PTOV1-AS2 ADM5 IL4I1 MIR6799 MED25
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain PRR12 RRAS PRRG2 NOSIP PRMT1 IRF3 BCL2L12 SCAF1 MIR5088 CPT1C ADM5
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion PRRG2 IRF3 SNORD35A RPS11 MIR6800 SCAF1 AP2A1 TSKS MIR150 SNORD32A FUZ SNORD34 BCL2L12 PTOV1-AS1 MIR5088 CPT1C FCGRT PRR12 RRAS NOSIP PRMT1 RCN3 ADM5 SNORD33 SNORD35B RPL13A MIR6799 MED25

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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