Hs00276094_cn

• Gene Symbol: STRA6
• Assay Reference Genome Location: Chr.15:74179726 on build GRCh38
• Cytoband: 15q24.1

Target Gene Details

• Entrez Gene ID: 64220
• Gene Name: stimulated by retinoic acid 6
• Gene Aliases: MCOPCB8, MCOPS9, PP14296
• Location: Chr.15:74179466-74212267 on Build GRCh38
• Assay Gene Location: Within Exon 24

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
STRA6	NM_001142617.1	19	2604	NP_001136089.1
	NM_001142618.1	19	2586	NP_001136090.1
	NM_001142619.1	19	2577	NP_001136091.1
	NM_001199040.1	19	2720	NP_001185969.1
	NM_001199041.1	19	2731	NP_001185970.1
	NM_001199042.1	19	2835	NP_001185971.1
	NM_022369.3	19	2540	NP_071764.3
	XM_011521883.1	19	2506	XP_011520185.1
	XM_011521884.1	19	2647	XP_011520186.1
	XM_017022478.1	19	2455	XP_016877967.1
	XM_017022479.1	19	2546	XP_016877968.1
	XM_017022480.1	19	2570	XP_016877969.1
	AF352728.1	19	2406	AAK30289.1
	AF352729.1	19	2516	AAK30290.1
	AF370419.2	19	2512	AAQ15255.2
	AK022603.1	15	2090	BAB14122.1
	AK056125.1	19	2601
	AK091152.1	19	2630
	AK092227.1	14	2067
	AY358748.1	19	2516	AAQ89108.1
	AY359089.1	19	2406	AAQ89447.1
	BC025256.1	19	2512	AAH25256.1
	BX537413.1	19	2482	CAD97655.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833053	Chr.15:74067815 - 74262799 on Build GRCh38	Loss	GOLGA6A ISLR2 LOC732265 ISLR STRA6 LOC283731 CCDC33
nsv1050884	Chr.15:74102642 - 74197072 on Build GRCh38	Gain	ISLR2 ISLR STRA6 LOC283731
nsv833054	Chr.15:74165302 - 74332942 on Build GRCh38	Loss	ISLR STRA6 CCDC33
nsv1121512	Chr.15:72670085 - 75273877 on Build GRCh38	Deletion	ULK3 SEMA7A BBS4 ARID3B STOML1 CYP11A1 PML ADPGK-AS1 FAM219B CYP1A2 LOC283731 MIR6882 CCDC33 EDC3 GOLGA6A C15orf59-AS1 COX5A ISLR LOC101929333 TBC1D21 ADPGK LOC105376731 SCAMP5 HCN4 MIR6881 HIGD2B CLK3 C15orf39 REC114 MIR4513 ISLR2 LOC107984728 NEO1 LOC102723750 GOLGA6C CD276 CPLX3 LOC732265 LOXL1-AS1 RPP25 CYP1A1 STRA6 CSK UBL7-AS1 LMAN1L NPTN-IT1 UBL7 C15orf59 SCAMP2 NPTN MPI PPCDC LOXL1 LOC729739

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

retinoid metabolic process
blood vessel development
kidney development
pulmonary valve morphogenesis
ventricular septum development
heart development
learning
feeding behavior
lung development
adrenal gland development
female genitalia development
vocal learning
ear development
nose morphogenesis
lung alveolus development
positive regulation of behavior
digestive tract morphogenesis
embryonic digestive tract development
developmental growth
smooth muscle tissue development
artery morphogenesis
cognition
neuromuscular process
vitamin transport
head development
head morphogenesis
face morphogenesis
lung vasculature development
diaphragm development
embryonic camera-type eye formation
eyelid development in camera-type eye
uterus morphogenesis
alveolar primary septum development
pulmonary artery morphogenesis
paramesonephric duct development
ductus arteriosus closure

Function(s)

receptor activity
vitamin transporter activity