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See other XKR5 CNV Assays ›
Gene Symbol
XKR5
Assay Reference Genome
Location

Chr.8:6812241 on build GRCh38
Cytoband
8p23.1
Assay ID Hs00280982_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 389610

Gene Name:

 XK related 5

Gene Aliases:

 HARL2754, UNQ2754, XRG5A, XRG5BM

Location:

 Chr.8:6808517-6835644 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
XKR5 NM_001289973.1 8 1307 NP_001276902.1
NM_207411.4 7 1169 NP_997294.3
XM_011534750.2 3 1675 XP_011533052.1
XM_017013401.1 6 1588 XP_016868890.1
XM_017013402.1 5 1380 XP_016868891.1
AY358489.1 7 1040 AAQ88853.1
AY534242.1 7 1169 AAT07091.1
AY534243.1 8 1161 AAT07092.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1021684 Chr.8:6492570 - 6951933 on Build GRCh38 Loss MCPH1-AS1 MCPH1 MIR4659B ANGPT2 DEFA4 AGPAT5 MIR8055 DEFA8P MIR4659A GS1-24F4.2 XKR5 DEFB1 DEFA6
nsv610004 Chr.8:6544845 - 6915391 on Build GRCh38 Gain MIR8055 MCPH1-AS1 MCPH1 MIR4659B MIR4659A ANGPT2 GS1-24F4.2 XKR5 DEFB1 AGPAT5
nsv1025976 Chr.8:6615427 - 6829450 on Build GRCh38 Loss MIR8055 MCPH1-AS1 MCPH1 MIR4659B MIR4659A XKR5 AGPAT5
esv3576520 Chr.8:6794391 - 7186524 on Build GRCh38 Gain DEFA1B DEFA1 DEFA10P DEFA7P DEFA4 DEFA5 DEFA11P DEFA3 DEFT1P2 DEFT1P DEFA8P GS1-24F4.2 XKR5 DEFB1 DEFA6 DEFA9P
esv2422383 Chr.8:6504868 - 6924071 on Build GRCh38 Duplication MIR8055 MCPH1-AS1 MCPH1 MIR4659B MIR4659A ANGPT2 GS1-24F4.2 XKR5 DEFB1 AGPAT5
nsv831220 Chr.8:6670324 - 6870969 on Build GRCh38 Gain MCPH1-AS1 MIR4659B MIR4659A GS1-24F4.2 XKR5 DEFB1 AGPAT5
nsv610006 Chr.8:6710680 - 7063882 on Build GRCh38 Gain DEFA1B DEFA1 MIR4659B DEFA10P DEFA7P DEFA4 DEFA5 DEFA11P AGPAT5 DEFA3 DEFT1P2 DEFT1P DEFA8P MIR4659A GS1-24F4.2 XKR5 DEFB1 DEFA6 DEFA9P
nsv1031577 Chr.8:6712833 - 8008628 on Build GRCh38 Gain DEFB108P1 FAM66B OR7E125P MIR4659B FAM90A10P DEFB106B LOC101929400 DEFT1P2 FAM90A7P DEFB4B DEFB104A DEFA6 DEFA1B USP17L4 DEFB4A ZNF705G LINC00965 DEFA5 DEFA11P DEFA3 USP17L3 DEFB104B DEFT1P DEFB103A DEFB106A GS1-24F4.2 OR7E154P SPAG11B DEFB107A DEFB1 DEFB109P1B DEFA9P DEFA1 ZNF705B DEFA10P PRR23D2 DEFA7P DEFA8P LOC107986910 XKR5 FAM66E DEFB105B USP17L8 DEFA4 DEFB107B PRR23D1 USP17L1 DEFB103B AGPAT5 MIR4659A DEFB105A SPAG11A LOC101928095
nsv465437 Chr.8:6797870 - 6971563 on Build GRCh38 Gain DEFA8P DEFA10P GS1-24F4.2 XKR5 DEFA4 DEFB1 DEFA6 DEFA9P
esv2752262 Chr.8:6781378 - 7153553 on Build GRCh38 Gain DEFA1B DEFA1 DEFA10P DEFA7P DEFA4 DEFA5 DEFA11P DEFA3 DEFT1P2 DEFT1P DEFA8P GS1-24F4.2 XKR5 DEFB1 DEFA6 DEFA9P
dgv6876n100 Chr.8:6687977 - 6812428 on Build GRCh38 Loss MCPH1-AS1 MIR4659B MIR4659A XKR5 AGPAT5

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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