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See other SPATA2L CNV Assays ›
Gene Symbol
SPATA2L
Assay Reference Genome
Location

Chr.16:89697683 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00300388_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 124044

Gene Name:

 spermatogenesis associated 2 like

Gene Aliases:

 C16orf76, tamo

Location:

 Chr.16:89696357-89701993 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA2L NM_152339.3 3 1013 NP_689552.2
XM_005256279.4 3 1430 XP_005256336.1
AF070574.1 1 244
AK127372.1 2 817
BC027606.1 AAH27606.1
BC039608.1 3 991 AAH39608.1
BC053588.1 3 995 AAH53588.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion SPATA2L CDK10 VPS9D1-AS1 ZNF276 VPS9D1 FANCA
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain SPATA2L CDK10 VPS9D1-AS1 SPIRE2 ZNF276 VPS9D1 SPATA33 LOC105371419 LOC107984817 FANCA
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss DBNDD1 CHMP1A TCF25 CENPBD1 GAS8-AS1 VPS9D1-AS1 MC1R ZNF276 SPATA33 TUBB3 DPEP1 SPATA2L CDK10 GAS8 AFG3L1P SPIRE2 DEF8 VPS9D1 LOC105371419 LOC107984817 FANCA
nsv516241 Chr.16:89696002 - 89723490 on Build GRCh38 Loss SPATA2L CDK10 VPS9D1-AS1 ZNF276 VPS9D1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss DBNDD1 CHMP1A CENPBD1 RPL13 VPS9D1-AS1 MC1R ZNF276 SPATA33 ZNF778 LOC101927817 DPEP1 GAS8 FAM157C SPIRE2 DEF8 LOC105371419 URAHP TCF25 LOC100287036 GAS8-AS1 PRDM7 CPNE7 TUBB3 SPATA2L CDK10 AFG3L1P SNORD68 VPS9D1 LOC105371414 LOC107984817 TUBB8P7 SPG7 ANKRD11 FANCA
nsv833330 Chr.16:89678466 - 89741783 on Build GRCh38 Loss SPATA2L CDK10 VPS9D1-AS1 ZNF276 VPS9D1 FANCA
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DBNDD1 CYBA RPL13 MIR4722 SPATA33 CTU2 LOC339059 TRAPPC2L DPEP1 MVD GAS8 LINC00304 SLC22A31 LOC105371419 LOC101927793 SNAI3 URAHP LOC105371409 CDH15 ACSF3 TCF25 LOC100287036 RNF166 GAS8-AS1 CPNE7 CDT1 LOC100289580 SPATA2L CDK10 VPS9D1 TUBB8P7 CBFA2T3 ANKRD11 FANCA SNAI3-AS1 PIEZO1 CHMP1A CENPBD1 LOC400558 VPS9D1-AS1 MC1R ZNF276 IL17C ZNF778 LOC101927817 PABPN1L FAM157C SPIRE2 DEF8 PRDM7 GALNS APRT TUBB3 LOC100129697 AFG3L1P LOC107987238 SNORD68 LOC105371414 LOC107984817 SPG7
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion CHMP1A RPL13 VPS9D1-AS1 ZNF276 SPATA33 CPNE7 DPEP1 SPATA2L CDK10 SNORD68 VPS9D1 SPG7 FANCA

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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