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See other SPATA2L CNV Assays ›
Gene Symbol
SPATA2L
Assay Reference Genome
Location

Chr.16:89701116 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00301607_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 124044

Gene Name:

 spermatogenesis associated 2 like

Gene Aliases:

 C16orf76, tamo

Location:

 Chr.16:89696357-89701993 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA2L NM_152339.3 2 204 NP_689552.2
XM_005256279.4 2 621 XP_005256336.1
AK127372.1
BC027606.1 2 201 AAH27606.1
BC039608.1 2 182 AAH39608.1
BC053588.1 2 186 AAH53588.1
BI917028.1 2 186

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion VPS9D1-AS1 ZNF276 FANCA VPS9D1 SPATA2L CDK10
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain SPIRE2 VPS9D1-AS1 ZNF276 SPATA33 FANCA LOC105371419 VPS9D1 SPATA2L LOC107984817 CDK10
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss ZNF276 AFG3L1P LOC107984817 CHMP1A CENPBD1 GAS8 DBNDD1 TUBB3 SPIRE2 VPS9D1-AS1 SPATA33 FANCA LOC105371419 VPS9D1 SPATA2L DPEP1 TCF25 DEF8 MC1R GAS8-AS1 CDK10
nsv516241 Chr.16:89696002 - 89723490 on Build GRCh38 Loss VPS9D1-AS1 ZNF276 VPS9D1 SPATA2L CDK10
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ZNF778 TUBB8P7 LOC107984817 FAM157C CHMP1A GAS8 DBNDD1 SNORD68 LOC105371419 LOC100287036 LOC105371414 DPEP1 DEF8 ANKRD11 CPNE7 MC1R GAS8-AS1 ZNF276 SPG7 AFG3L1P PRDM7 CENPBD1 TUBB3 URAHP LOC101927817 SPIRE2 VPS9D1-AS1 SPATA33 FANCA VPS9D1 SPATA2L TCF25 RPL13 CDK10
nsv833330 Chr.16:89678466 - 89741783 on Build GRCh38 Loss VPS9D1-AS1 ZNF276 FANCA VPS9D1 SPATA2L CDK10
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss ZNF778 LOC400558 LOC105371409 TUBB8P7 CHMP1A DBNDD1 SNORD68 LOC105371419 LOC100287036 MVD IL17C LOC105371414 TRAPPC2L PIEZO1 DPEP1 DEF8 GAS8-AS1 SNAI3 ZNF276 SPG7 AFG3L1P LOC339059 PRDM7 SNAI3-AS1 CENPBD1 LINC00304 TUBB3 SPIRE2 VPS9D1-AS1 PABPN1L FANCA APRT SLC22A31 RPL13 LOC107984817 FAM157C GAS8 LOC101927793 LOC100129697 ACSF3 CTU2 ANKRD11 CPNE7 MC1R RNF166 URAHP LOC107987238 LOC101927817 CDH15 LOC100289580 MIR4722 SPATA33 CDT1 VPS9D1 CBFA2T3 SPATA2L CYBA GALNS TCF25 CDK10
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion ZNF276 SPG7 CHMP1A VPS9D1-AS1 SPATA33 FANCA SNORD68 VPS9D1 SPATA2L DPEP1 CPNE7 RPL13 CDK10

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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