Hs00302559_cn

• Gene Symbol: FAM189B
• Assay Reference Genome Location: Chr.1:155255253 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 10712
• Gene Name: family with sequence similarity 189 member B
• Gene Aliases: C1orf2, COTE1
• Location: Chr.1:155247205-155255483 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM189B	NM_001267608.1	1	231	NP_001254537.1
	NM_006589.2	1	231	NP_006580.2
	NM_198264.1	1	231	NP_937995.1
	XM_005244845.1	1	225	XP_005244902.1
	AK093335.1	1	231
	BC008854.2	1	95	AAH08854.1
	BC010471.1	1	135	AAH10471.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831636	Chr.1:155249432 - 155475073 on Build GRCh38	Loss	RUSC1-AS1 POU5F1P4 PKLR CLK2 SCAMP3 FAM189B ASH1L FDPS LOC105371451 MIR555 RUSC1 HCN3
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	THBS3 GBAP1 MUC1 SCAMP3 FAM189B GBA TRIM46 MTX1 MIR92B KRTCAP2
esv33869	Chr.1:155253492 - 155948170 on Build GRCh38	Loss	MSTO2P CLK2 RXFP4 RUSC1 ARHGEF2 SCARNA26B PKLR SCAMP3 KIAA0907 MIR555 MSTO1 SCARNA26A ASH1L-AS1 RIT1 SYT11 GON4L SCARNA4 HCN3 RUSC1-AS1 DAP3 POU5F1P4 YY1AP1 LOC100505728 SNORA80E FAM189B ASH1L FDPS LOC105371451
nsv1011773	Chr.1:155219357 - 155265030 on Build GRCh38	Gain	GBAP1 CLK2 SCAMP3 FAM189B GBA
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	SLC50A1 EFNA1 CLK2 DPM3 RUSC1 HCN3 MIR92B RUSC1-AS1 THBS3 GBAP1 PKLR MUC1 SCAMP3 FAM189B GBA TRIM46 ASH1L FDPS LOC105371451 MTX1 KRTCAP2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

protein binding
WW domain binding