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See other ATF6B CNV Assays ›
Gene Symbol
ATF6B
Assay Reference Genome
Location

Chr.6:32115914 on build GRCh38
Cytoband
6p21.32
Assay ID Hs00304440_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1388

Gene Name:

 activating transcription factor 6 beta

Gene Aliases:

 CREB-RP, CREBL1, G13

Location:

 Chr.6:32115268-32128240 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 17 - Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATF6B NM_001136153.1 NP_001129625.1
NM_004381.4 NP_004372.3
BC077075.1 AAH77075.1
U31903.1 AAA97438.1
U52701.1
X98054.1 CAA66664.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830629 Chr.6:32076201 - 32222010 on Build GRCh38 Loss PPT2 PBX2 MIR6833 FKBPL RNF5 PRRT1 NOTCH4 LOC100507547 GPSM3 EGFL8 AGPAT1 AGER ATF6B MIR6721 PPT2-EGFL8 TNXB
dgv10472n54 Chr.6:31985690 - 32812026 on Build GRCh38 Loss C6orf10 MIR6833 FKBPL PRRT1 HLA-DQA2 LOC100507547 TNXA HLA-DQA1 MIR3135B HLA-DQB1-AS1 LOC101929163 EGFL8 AGPAT1 HLA-DRA ATF6B PPT2-EGFL8 HLA-DRB5 C4A HLA-DRB1 CYP21A2 PPT2 PBX2 BTNL2 RNF5 HLA-DQB2 HLA-DQB1 C4B NOTCH4 CYP21A1P HCG23 HLA-DRB6 GPSM3 AGER MIR6721 TNXB
dgv10463n54 Chr.6:31817661 - 32683279 on Build GRCh38 Loss C6orf10 C2 SLC44A4 TNXA AGPAT1 HLA-DRA HLA-DRB5 HLA-DRB1 CYP21A2 PPT2 PBX2 BTNL2 NEU1 C4B ZBTB12 NOTCH4 HCG23 SNORD52 GPSM3 MIR6721 TNXB SNORD48 MIR6833 FKBPL C2-AS1 PRRT1 STK19 HSPA1B LOC100507547 HLA-DQA1 HLA-DQB1-AS1 HSPA1A LOC101929163 EGFL8 C6orf48 ATF6B PPT2-EGFL8 C4A RNF5 HLA-DQB1 MIR1236 EHMT2 CYP21A1P CFB HLA-DRB6 NELFE DXO AGER SKIV2L
esv2759415 Chr.6:31903735 - 32241336 on Build GRCh38 Gain+Loss MIR6833 FKBPL C2-AS1 PRRT1 STK19 LOC100507547 C2 TNXA EGFL8 AGPAT1 ATF6B PPT2-EGFL8 C4A CYP21A2 PPT2 PBX2 RNF5 C4B MIR1236 NOTCH4 CYP21A1P CFB NELFE GPSM3 DXO AGER MIR6721 TNXB SKIV2L
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion C6orf10 MIR4646 MCCD1 LY6G6C DDX39B LOC100287329 C2 SLC44A4 TNXA ATP6V1G2 LY6G5B DDX39B-AS1 HSPA1L AIF1 SAPCD1-AS1 LOC102725068 AGPAT1 TNF HLA-DRA SAPCD1 HLA-DRB5 HLA-DRB1 CYP21A2 HCP5 PPT2 PBX2 BTNL2 SNORD117 C6orf47 NEU1 C4B ZBTB12 NOTCH4 NFKBIL1 LY6G5C HCG23 SNORD52 MSH5 GPSM3 ABHD16A MIR6721 SNORA38 TNXB SNORD48 PRRC2A MIR6833 FKBPL CLIC1 C2-AS1 PRRT1 STK19 HSPA1B LY6G6E LOC100507547 DDAH2 VARS LY6G6F GPANK1 HSPA1A LTA CSNK2B LY6G6D LOC101929163 EGFL8 C6orf48 ATF6B PPT2-EGFL8 VWA7 C4A NCR3 RNF5 MIR1236 EHMT2 CYP21A1P CFB SNORD84 LSM2 HLA-DRB6 NELFE MIR6832 APOM MSH5-SAPCD1 MICB LST1 LTB DXO AGER HCG26 C6orf25 BAG6 ATP6V1G2-DDX39B SKIV2L
nsv1028506 Chr.6:32105835 - 32139754 on Build GRCh38 Gain FKBPL ATF6B TNXB
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion HLA-DOA HLA-DPB2 TAP1 LOC100287329 HCG25 C2 WDR46 TNXA ATP6V1G2 LY6G5B RING1 AIF1 AGPAT1 COL11A2 TNF HLA-DRB1 SNORD117 NFKBIL1 LY6G5C HCG23 MSH5 HSD17B8 B3GALT4 RPS18 RGL2 PPP1R2P1 MIR6721 TNXB MIR6833 FKBPL CLIC1 C2-AS1 HSPA1B VARS GPANK1 HLA-DQB1-AS1 LTA CSNK2B LOC101929163 ATF6B HLA-DPA1 PPT2-EGFL8 VWA7 PSMB8 HLA-DMB HLA-DQB2 HLA-DQB1 BRD2 CYP21A1P SNORD84 SYNGAP1 LSM2 TAP2 MSH5-SAPCD1 MICB HLA-DOB LTB AGER C6orf10 MIR4646 MCCD1 LY6G6C DDX39B SLC44A4 MIR3135B DDX39B-AS1 SLC39A7 HSPA1L SAPCD1-AS1 LOC102725068 HLA-DRA LOC100294145 SAPCD1 HLA-DRB5 PSMB8-AS1 CUTA CYP21A2 HCP5 PPT2 PBX2 BTNL2 C6orf47 NEU1 C4B ZBTB12 NOTCH4 KIFC1 MIR6873 SNORD52 GPSM3 MIR219A1 HLA-DPB1 ABHD16A ZBTB9 SNORA38 SNORD48 PRRC2A MIR6834 PRRT1 STK19 HLA-DQA2 HLA-DMA MIR5004 LY6G6E RXRB LOC100507547 DDAH2 HLA-DQA1 LY6G6F VPS52 HSPA1A LY6G6D PSMB9 EGFL8 C6orf48 C4A NCR3 RNF5 MIR1236 EHMT2 PHF1 CFB ZBTB22 TAPBP HLA-DRB6 NELFE MIR6832 APOM DAXX LST1 DXO HCG26 C6orf25 HCG24 BAG6 ATP6V1G2-DDX39B PFDN6 SKIV2L
nsv602104 Chr.6:32096949 - 32203906 on Build GRCh38 Loss PPT2 PBX2 MIR6833 FKBPL RNF5 PRRT1 NOTCH4 LOC100507547 GPSM3 EGFL8 AGPAT1 AGER ATF6B MIR6721 PPT2-EGFL8 TNXB
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion HLA-DOA HLA-DPB2 TAP1 LOC100287329 HCG25 C2 WDR46 TNXA ATP6V1G2 LY6G5B RING1 AIF1 AGPAT1 COL11A2 TNF HLA-DRB1 SNORD117 NFKBIL1 LY6G5C HCG23 MSH5 HSD17B8 B3GALT4 RPS18 RGL2 PPP1R2P1 MIR6721 TNXB MIR6833 FKBPL CLIC1 C2-AS1 HSPA1B VARS GPANK1 HLA-DQB1-AS1 LTA CSNK2B LOC101929163 ATF6B HLA-DPA1 PPT2-EGFL8 VWA7 PSMB8 HLA-DMB HLA-DQB2 HLA-DQB1 BRD2 CYP21A1P SNORD84 SYNGAP1 LSM2 TAP2 MSH5-SAPCD1 MICB HLA-DOB LTB AGER C6orf10 MIR4646 MCCD1 LY6G6C DDX39B SLC44A4 MIR3135B DDX39B-AS1 SLC39A7 HSPA1L SAPCD1-AS1 LOC102725068 HLA-DRA LOC100294145 SAPCD1 HLA-DRB5 PSMB8-AS1 CUTA CYP21A2 HCP5 PPT2 PBX2 BTNL2 C6orf47 NEU1 C4B ZBTB12 NOTCH4 KIFC1 MIR6873 SNORD52 GPSM3 MIR219A1 HLA-DPB1 ABHD16A ZBTB9 SNORA38 SNORD48 PRRC2A MIR6834 PRRT1 STK19 HLA-DQA2 HLA-DMA MIR5004 LY6G6E RXRB LOC100507547 DDAH2 HLA-DQA1 LY6G6F VPS52 HSPA1A LY6G6D PSMB9 EGFL8 C6orf48 C4A NCR3 RNF5 MIR1236 EHMT2 PHF1 CFB ZBTB22 TAPBP HLA-DRB6 NELFE MIR6832 APOM DAXX LST1 DXO HCG26 C6orf25 HCG24 BAG6 ATP6V1G2-DDX39B PFDN6 SKIV2L
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss C6orf10 MIR4646 MCCD1 LY6G6C DDX39B LOC100287329 C2 SLC44A4 TNXA ATP6V1G2 LY6G5B DDX39B-AS1 HSPA1L AIF1 SAPCD1-AS1 LOC102725068 AGPAT1 TNF HLA-DRA SAPCD1 CYP21A2 HCP5 PPT2 PBX2 BTNL2 SNORD117 C6orf47 NEU1 C4B ZBTB12 NOTCH4 NFKBIL1 LY6G5C HCG23 SNORD52 MSH5 GPSM3 ABHD16A MIR6721 SNORA38 TNXB SNORD48 MIR6891 PRRC2A MIR6833 FKBPL CLIC1 C2-AS1 PRRT1 STK19 HSPA1B HLA-B LY6G6E LOC100507547 DDAH2 VARS LY6G6F GPANK1 HSPA1A LTA CSNK2B LY6G6D LOC101929163 EGFL8 C6orf48 ATF6B PPT2-EGFL8 VWA7 C4A NCR3 RNF5 MIR1236 EHMT2 CYP21A1P CFB SNORD84 MICA LSM2 NELFE MIR6832 APOM MSH5-SAPCD1 MICB LST1 LTB DXO AGER HCG26 C6orf25 BAG6 ATP6V1G2-DDX39B SKIV2L

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