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See other GNPTG CNV Assays ›
Gene Symbol
GNPTG
Assay Reference Genome
Location

Chr.16:1362629 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00311910_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84572

Gene Name:

 N-acetylglucosamine-1-phosphate transferase gamma subunit

Gene Aliases:

 C16orf27, GNPTAG, LP2537, RJD9

Location:

 Chr.16:1351899-1363351 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 9 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GNPTG NM_032520.4 NP_115909.1
XM_017023782.1 XP_016879271.1
XM_017023783.1 XP_016879272.1
AF302786.1 AAG27706.1
AK126110.1 3 1851
AK312067.1
AY203933.1 AAP34456.1
BC014592.1 AAH14592.1
BC131525.1
BU145878.1
BX398427.1
CD671181.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain C16orf91 CCDC154 BAIAP3 GNPTG UBE2I CLCN7 LOC105371045 PTX4 TELO2 TSR3 IFT140 UNKL
dgv473e214 Chr.16:1356674 - 1364974 on Build GRCh38 Loss GNPTG UNKL
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TPSD1 BAIAP3 PRR25 RHOT2 MCRIP2 RHBDL1 MIR4516 FAM234A TPSG1 LOC105371049 C16orf59 CLCN7 NPW SLC9A3R2 MIR6511B1 E4F1 LOC100287175 MIR3177 LOC105371038 HBZ C16orf91 MSRB1 PRR35 SYNGR3 HS3ST6 TPSAB1 TELO2 PIGQ POLR3K EME2 MRPS34 NPRL3 RNF151 CASKIN1 PGP STUB1 NUBP2 C1QTNF8 ABCA17P RPL3L WDR24 AXIN1 MIR940 MIR6859-4 HBM CRAMP1 CAPN15 WFIKKN1 NHLRC4 DNASE1L2 SNORD60 SPSB3 CACNA1H RNPS1 MIR6767 MPG SNRNP25 TMEM204 NARFL RPL23AP5 MSLN NDUFB10 MIR3677 PKD1 FBXL16 CEMP1 RAB11FIP3 MIR4717 RPUSD1 FAM173A BRICD5 GFER MIR3180-5 LOC106660606 LOC107987233 PRSS29P JMJD8 NTN3 HBA2 DDX11L10 SNORA78 MIR6768 KCTD5 NTHL1 SNHG9 LMF1 HAGH ABCA3 LOC105371046 WASIR2 ARHGDIG MIR662 HAGHL TRAF7 ZNF598 SNORA10 MAPK8IP3 CCDC154 SSTR5 GNPTG MIR3176 CCDC78 RGS11 CHTF18 UNKL MLST8 FAHD1 TSC2 NME4 NOXO1 RAB26 SNHG19 LOC100134368 WDR90 PDIA2 LOC101929280 AMDHD2 NME3 MIR5587 LUC7L ATP6V0C SNORA64 LOC105371045 LOC652276 PDPK1 ERVK13-1 PRSS27 IGFALS ECI1 GNG13 DECR2 TBC1D24 PTX4 METTL26 MEIOB HN1L MIR3178 HBQ1 SSTR5-AS1 TPSB2 LOC107984876 SOX8 MIR1225 RHBDF1 LINC00254 IFT140 RPS2 TBL3 UBE2I METRN MRPL28 FLJ42627 CCNF LOC729652 HBA1 LOC105371184 RAB40C TSR3 LMF1-AS1 LINC00235 TMEM8A LOC105371047
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss C16orf91 TPSD1 BAIAP3 UBE2I TPSAB1 TPSG1 CCDC154 PRSS29P SSTR5-AS1 SSTR5 GNPTG TPSB2 CLCN7 LOC105371045 CACNA1H LOC107984876 SOX8 C1QTNF8 TSR3 LMF1-AS1 LMF1 UNKL
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain TPSD1 BAIAP3 UBE2I TPSAB1 TPSG1 PRSS29P SSTR5-AS1 SSTR5 GNPTG TPSB2 CACNA1H C1QTNF8 TSR3 UNKL
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss TPSD1 BAIAP3 UBE2I TPSAB1 TPSG1 PRSS29P SSTR5-AS1 SSTR5 GNPTG TPSB2 CACNA1H SOX8 C1QTNF8 TSR3 LMF1-AS1 LMF1 UNKL
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion C16orf91 TPSD1 BAIAP3 UBE2I PTX4 TPSAB1 TELO2 TPSG1 CCDC154 PRSS29P GNPTG TPSB2 CLCN7 LOC105371045 CACNA1H TSR3 IFT140 TMEM204 LOC105371047 UNKL
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss C16orf91 PRSS29P TPSD1 BAIAP3 GNPTG UBE2I TPSAB1 TSR3 UNKL
esv3637616 Chr.16:1356693 - 1364925 on Build GRCh38 Gain GNPTG UNKL

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