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See other CLCN7 CNV Assays ›
Gene Symbol
CLCN7
Assay Reference Genome
Location

Chr.16:1446161 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00318556_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 1186

Gene Name:

 chloride voltage-gated channel 7

Gene Aliases:

 CLC-7, CLC7, OPTA2, OPTB4, PPP1R63

Location:

 Chr.16:1444933-1475084 on Build GRCh38

Assay Gene Location:

 Within Exon 26
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CLCN7 NM_001114331.2 24 2926 NP_001107803.1
NM_001287.5 25 2998 NP_001278.1
XM_011522354.1 25 3080 XP_011520656.1
AF224741.1 25 2926 AAF34711.1
AK056551.1 24 2867
AK096963.1 7 1923
AK122944.1 25 3514
AK128285.1 9 2912
AK130196.1 3 830
BC004946.1 8 1258 AAH04946.1
BC006158.1 14 1833 AAH06158.1
BC012737.2 25 2925 AAH12737.1
U88844.1 3 661 AAB48530.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571161 Chr.16:1431019 - 1457987 on Build GRCh38 Gain CCDC154 CLCN7 LOC105371045
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain CCDC154 PTX4 CLCN7 GNPTG UBE2I LOC105371045 TSR3 TELO2 IFT140 BAIAP3 UNKL C16orf91
nsv471068 Chr.16:1439259 - 1460566 on Build GRCh38 Gain CCDC154 CLCN7
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication C16orf59 TBC1D24 IFT140 NHLRC4 SNORA64 UNKL NTN3 PRSS27 MIR5587 LUC7L GNPTG CCNF WASIR2 FAHD1 FAM173A RHOT2 PDIA2 UBE2I TMEM204 CRAMP1 HBA2 HAGHL LMF1 C16orf91 MRPS34 MIR6768 TMEM8A KCTD5 SNORD60 TSC2 TPSAB1 LOC100287175 MIR940 FAM234A LOC105371184 RPL3L TPSG1 RAB11FIP3 DNASE1L2 MIR6767 PGP BRICD5 MSRB1 MIR3176 NPW AMDHD2 HBQ1 SNHG9 SNORA10 RGS11 METRN TPSB2 LOC107987233 RPUSD1 CHTF18 NUBP2 TRAF7 NME4 HBZ FLJ42627 CEMP1 SNRNP25 LOC729652 TBL3 RNPS1 EME2 PKD1 MIR4516 MEIOB ERVK13-1 MCRIP2 WDR24 CASKIN1 ABCA3 GNG13 SPSB3 ARHGDIG LOC106660606 C1QTNF8 RNF151 PRSS29P DDX11L10 METTL26 LOC105371047 TSR3 MIR3180-5 MIR3177 RAB40C SNHG19 PRR35 ATP6V0C LOC652276 SSTR5-AS1 CAPN15 MSLN ECI1 LOC100134368 WFIKKN1 GFER HN1L NPRL3 LMF1-AS1 SYNGR3 MLST8 PIGQ ZNF598 PRR25 MIR1225 HS3ST6 MIR6511B1 MIR6859-4 NDUFB10 CLCN7 RAB26 CACNA1H TPSD1 MIR3178 PDPK1 NTHL1 MIR4717 MIR662 IGFALS RPL23AP5 HAGH WDR90 ABCA17P DECR2 RHBDL1 CCDC154 FBXL16 NME3 TELO2 STUB1 MAPK8IP3 LOC105371046 SOX8 CCDC78 LOC107984876 MPG LINC00235 POLR3K HBM RPS2 JMJD8 SSTR5 SNORA78 NARFL SLC9A3R2 LOC101929280 RHBDF1 E4F1 HBA1 NOXO1 LINC00254 PTX4 LOC105371045 MRPL28 AXIN1 MIR3677 BAIAP3 LOC105371049 LOC105371038
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss CCDC154 TPSG1 CLCN7 UBE2I SSTR5-AS1 CACNA1H SOX8 TPSD1 UNKL C1QTNF8 LOC107984876 PRSS29P LMF1 C16orf91 LMF1-AS1 TPSB2 GNPTG LOC105371045 TSR3 BAIAP3 TPSAB1 SSTR5
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion CCDC154 TPSG1 CLCN7 UBE2I TMEM204 TELO2 IFT140 CACNA1H TPSD1 UNKL PRSS29P C16orf91 TPSB2 PTX4 GNPTG LOC105371047 LOC105371045 TSR3 BAIAP3 TPSAB1
nsv817713 Chr.16:1426464 - 1460566 on Build GRCh38 Loss CCDC154 CLCN7 LOC105371045
nsv819844 Chr.16:1401518 - 1457987 on Build GRCh38 Gain CCDC154 CLCN7 LOC105371045 UNKL C16orf91

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