Hs00318872_cn

• Gene Symbol: YBX2
• Assay Reference Genome Location: Chr.17:7288437 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 51087
• Gene Name: Y-box binding protein 2
• Gene Aliases: CONTRIN, CSDA3, DBPC, MSY2
• Location: Chr.17:7288252-7294602 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YBX2	NM_015982.3	9	1398	NP_057066.2
	XM_017024713.1	10	1488	XP_016880202.1
	AB208818.1	6	4379	BAD92055.1
	AF096834.1	9	1396	AAD30662.1
	AI805280.1	1	209
	AK092747.1	8	2015
	BC033800.1	9	1361	AAH33800.1
	BC047760.1	9	1362	AAH47760.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	FBXO39 ACAP1 YBX2 C17orf49 SENP3 EIF4A1 BCL6B GABARAP ALOX12P2 SLC2A4 TEKT1 C17orf74 RNASEK-C17orf49 POLR2A CLDN7 PHF23 PLSCR3 SNORA48 MIR324 ASGR2 DVL2 SENP3-EIF4A1 SNORD10 SNORA67 EIF5A ACADVL ASGR1 ZBTB4 TMEM256-PLSCR3 ATP1B2 SPEM1 KCTD11 CHRNB1 TMEM256 MPDU1 SHBG SLC35G6 ALOX12 FXR2 SLC16A11 ALOX12-AS1 SAT2 NEURL4 TNFSF13 TMEM95 DLG4 MIR497 TMEM102 TNK1 RNASEK MIR497HG NLGN2 CD68 ELP5 FGF11 LOC100996842 CTDNEP1 TNFSF12-TNFSF13 TNFSF12 CLEC10A SLC16A13 LOC107983988 SOX15 MIR195 GPS2
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	KCTD11 CHRNB1 ACAP1 TMEM256 YBX2 NEURL4 GABARAP TMEM95 DLG4 TMEM102 TNK1 SLC2A4 C17orf74 NLGN2 CLDN7 PHF23 ELP5 FGF11 PLSCR3 CTDNEP1 MIR324 DVL2 LOC107983988 EIF5A ACADVL ASGR1 TMEM256-PLSCR3 GPS2 SPEM1
esv2665200	Chr.17:7091816 - 7333062 on Build GRCh38	Deletion	CLDN7 PHF23 YBX2 ELP5 CTDNEP1 MIR324 ASGR2 DVL2 NEURL4 GABARAP DLG4 EIF5A ACADVL ASGR1 SLC2A4 GPS2
nsv574322	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	ACAP1 YBX2 C17orf49 SENP3 EIF4A1 BCL6B GABARAP SLC2A4 C17orf74 RNASEK-C17orf49 POLR2A CLDN7 PHF23 PLSCR3 SNORA48 MIR324 ASGR2 DVL2 SENP3-EIF4A1 SNORD10 SNORA67 EIF5A ACADVL ASGR1 ZBTB4 TMEM256-PLSCR3 ATP1B2 SPEM1 KCTD11 CHRNB1 TMEM256 MPDU1 SHBG TP53 SLC35G6 ALOX12 FXR2 SLC16A11 ALOX12-AS1 SAT2 NEURL4 TNFSF13 TMEM95 DLG4 MIR497 TMEM102 TNK1 RNASEK MIR497HG NLGN2 CD68 ELP5 FGF11 LOC100996842 CTDNEP1 TNFSF12-TNFSF13 TNFSF12 WRAP53 CLEC10A SLC16A13 LOC107983988 SOX15 MIR195 GPS2
nsv1963	Chr.17:7244585 - 7333855 on Build GRCh38	Deletion	CLDN7 YBX2 NEURL4 ELP5 EIF5A SLC2A4 CTDNEP1 GPS2
esv3639863	Chr.17:7280422 - 7290803 on Build GRCh38	Loss	YBX2 SLC2A4

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
spermatogenesis
translational attenuation
oocyte development

Function(s)

DNA binding
RNA binding