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See other PIGQ CNV Assays ›
Gene Symbol
PIGQ
Assay Reference Genome
Location

Chr.16:574605 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00322936_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9091

Gene Name:

 phosphatidylinositol glycan anchor biosynthesis class Q

Gene Aliases:

 GPI1, c407A10.1

Location:

 Chr.16:569968-584136 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIGQ NM_004204.3 2 669 NP_004195.2
NM_148920.2 2 669 NP_683721.1
AB003723.1 2 633 BAA24948.1
AF030177.1 2 602 AAC32661.1
AK300297.1 2 636
AK314361.1 3 698
BC006377.2 2 619 AAH06377.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833113 Chr.16:506513 - 628160 on Build GRCh38 Loss RAB40C RAB11FIP3 CAPN15 MIR3176 NHLRC4 LOC101929280 MIR5587 PIGQ PRR35 LINC00235 LOC107987233
esv3637579 Chr.16:574322 - 585512 on Build GRCh38 Loss PIGQ
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication HBZ MIR662 NTHL1 LOC105371047 LMF1 TMEM204 TPSAB1 RPUSD1 BRICD5 NOXO1 IGFALS MRPL28 FAM173A ECI1 UBE2I ABCA3 NDUFB10 RPL23AP5 TELO2 LOC105371184 RNF151 PIGQ DNASE1L2 AMDHD2 PKD1 HS3ST6 CHTF18 KCTD5 MCRIP2 ZNF598 LOC105371045 MIR6859-4 CLCN7 LOC100287175 PRSS29P NPRL3 SNORA10 ATP6V0C CEMP1 PDPK1 POLR3K GNG13 ERVK13-1 WFIKKN1 FBXL16 UNKL RHBDF1 ABCA17P MIR5587 LOC729652 RGS11 FAM234A SNORA64 C16orf59 SNHG19 SPSB3 TRAF7 FAHD1 LOC107984876 TBC1D24 MPG PDIA2 LOC105371038 FLJ42627 TSR3 LOC106660606 RNPS1 TPSB2 METRN NPW WASIR2 TPSG1 MIR3677 LOC107987233 MIR6767 MIR3180-5 SOX8 MIR3176 SSTR5-AS1 CACNA1H RPL3L SNORA78 LUC7L RPS2 HBM NARFL C16orf91 TPSD1 NME4 MIR6768 LINC00235 NUBP2 HBQ1 MIR4516 WDR24 GNPTG LINC00254 NHLRC4 TSC2 STUB1 CCDC154 MAPK8IP3 MRPS34 CASKIN1 MSRB1 NME3 JMJD8 CRAMP1 HAGH TBL3 RAB11FIP3 LOC105371046 CCDC78 MIR4717 PRSS27 LMF1-AS1 IFT140 PTX4 EME2 LOC100134368 ARHGDIG LOC105371049 RHOT2 LOC101929280 PRR25 AXIN1 SNORD60 DECR2 MIR3177 BAIAP3 HAGHL SYNGR3 SSTR5 HBA2 GFER CAPN15 CCNF MIR6511B1 C1QTNF8 SNRNP25 SNHG9 SLC9A3R2 HN1L PGP MIR1225 DDX11L10 PRR35 MLST8 TMEM8A MSLN MIR940 RAB26 LOC652276 RHBDL1 METTL26 RAB40C HBA1 MEIOB E4F1 WDR90 MIR3178 NTN3
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss LOC100287175 MIR3176 MIR662 RHOT2 LOC101929280 PRR25 GNG13 WFIKKN1 HAGHL FBXL16 RPUSD1 CAPN15 MIR5587 NARFL FAM173A PRR35 LINC00235 WDR24 NHLRC4 STUB1 MSLN LOC105371184 PIGQ RHBDL1 LOC105371038 METTL26 JMJD8 RAB40C RAB11FIP3 CCDC78 CHTF18 MCRIP2 WDR90 METRN LOC107987233
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss LOC100287175 MIR3176 MIR662 RHOT2 LOC101929280 PRR25 GNG13 WFIKKN1 HAGHL FBXL16 RPUSD1 CAPN15 MIR5587 NARFL FAM173A PRR35 LINC00235 WDR24 NHLRC4 STUB1 MSLN LOC105371184 PIGQ RHBDL1 LOC105371038 METTL26 JMJD8 RAB40C RAB11FIP3 CCDC78 CHTF18 MCRIP2 WDR90 METRN LOC107987233
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LOC100287175 SOX8 MIR3176 MIR662 SSTR5-AS1 RHOT2 LOC101929280 PRR25 LMF1 GNG13 WFIKKN1 HAGHL FBXL16 SSTR5 RPUSD1 CAPN15 C1QTNF8 MIR5587 NARFL FAM173A PRR35 LINC00235 WDR24 NHLRC4 STUB1 MSLN LOC107984876 LOC105371184 PIGQ RHBDL1 LOC105371038 METTL26 JMJD8 RAB40C RAB11FIP3 CCDC78 CHTF18 MCRIP2 WDR90 METRN LMF1-AS1 LOC107987233
dgv4823n54 Chr.16:562698 - 662867 on Build GRCh38 Loss LOC100287175 RAB40C NHLRC4 LOC101929280 MCRIP2 WDR90 PIGQ LOC105371038 METTL26 PRR35 WFIKKN1 LOC107987233
nsv457304 Chr.16:554554 - 611142 on Build GRCh38 Gain RAB40C CAPN15 NHLRC4 LOC101929280 PIGQ PRR35 LOC107987233
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication LOC100287175 MIR3176 MIR662 RHOT2 LOC101929280 PRR25 GNG13 WFIKKN1 HAGHL FBXL16 RPUSD1 CAPN15 MIR5587 NARFL FAM173A PRR35 LINC00235 WDR24 NHLRC4 STUB1 MSLN LOC105371184 PIGQ RHBDL1 LOC105371038 METTL26 JMJD8 RAB40C RAB11FIP3 CCDC78 CHTF18 MCRIP2 WDR90 METRN LOC107987233

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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