Hs00331560_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82661043 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2			NP_006813.1
	XM_005256334.4	3	537	XP_005256391.1
	XM_005256335.3			XP_005256392.1
	XM_006722271.3			XP_006722334.1
	XM_011523528.2			XP_011521830.1
	XM_017024042.1	4	969	XP_016879531.1
	XM_017024043.1	3	446	XP_016879532.1
	AB209711.1			BAD92948.1
	AK124376.1
	AL047483.1
	BC018039.1			AAH18039.1
	U05227.1			AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	LOC105376791 ZNF750 B3GNTL1 FN3KRP RAB40B FOXK2 MIR4525 TBCD LOC105371944 FN3K WDR45B METRNL LOC101929552
nsv833575	Chr.17:82660876 - 82847512 on Build GRCh38	Loss	MIR4525 TBCD LOC105376791 ZNF750 FN3K FN3KRP RAB40B LOC101929552
esv3641436	Chr.17:82659688 - 82666055 on Build GRCh38	Loss	RAB40B
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	MIR4525 WDR45B RAB40B FOXK2
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	MIR4525 OGFOD3 C17orf62 NARF HEXDC WDR45B RAB40B FOXK2
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	STRA13 NPLOC4 SIRT7 HGS DUS1L LOC101929511 B3GNTL1 FN3KRP GCGR PPP1R27 LINC00482 LRRC45 ALYREF TEX19 LOC105376790 ACTG1 P4HB LOC100130370 ARL16 CEP131 MIR3186 FSCN2 C17orf89 FOXK2 MIR6786 CD7 MIR4525 TSPAN10 FAAP100 CSNK1D C17orf62 SECTM1 MIR4740 FN3K SLC38A10 LOC101929552 ASPSCR1 LOC105376791 AATK SLC16A3 ZNF750 UTS2R GPS1 AATK-AS1 TEPSIN MAFG DCXR LOC105371944 MYADML2 NARF FASN WDR45B CCDC137 OXLD1 SNORD134 PCYT2 OGFOD3 SLC25A10 NPB LOC105371925 ARHGDIA HEXDC NOTUM CCDC57 RAB40B MRPL12 MIR6787 TMEM105 BAHCC1 TBCD RAC3 MAFG-AS1 PYCR1 RFNG ANAPC11 MCRIP1 PDE6G
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	OGFOD3 LOC105376791 ZNF750 HEXDC LOC101929511 FN3KRP UTS2R RAB40B FOXK2 CD7 MIR4525 TBCD CSNK1D C17orf62 SECTM1 TEX19 LOC105376790 NARF FN3K WDR45B LOC101929552
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	STRA13 SIRT7 DUS1L LOC101929511 B3GNTL1 FN3KRP PPP1R27 LRRC45 ALYREF TEX19 LOC105376790 P4HB FOXK2 CD7 MIR4525 CSNK1D C17orf62 SECTM1 FN3K LOC101929552 ASPSCR1 LOC105376791 SLC16A3 ZNF750 UTS2R GPS1 MAFG DCXR LOC105371944 MYADML2 NARF FASN WDR45B SNORD134 PCYT2 OGFOD3 NPB ARHGDIA HEXDC NOTUM CCDC57 RAB40B MIR6787 TBCD RAC3 MAFG-AS1 PYCR1 RFNG ANAPC11 MCRIP1 METRNL

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding