Hs00339828_cn

• Gene Symbol: SF3A2
• Assay Reference Genome Location: Chr.19:2236870 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 8175
• Gene Name: splicing factor 3a subunit 2
• Gene Aliases: PRP11, PRPF11, SAP62, SF3a66
• Location: Chr.19:2236817-2248679 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SF3A2	NM_007165.4			NP_009096.2
	AK314815.1
	BC004434.1			AAH04434.1
	BC009903.2			AAH09903.1
	BC015804.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv2389	Chr.19:2206862 - 2240689 on Build GRCh38	Insertion	PLEKHJ1 SF3A2 LOC105372239 DOT1L MIR6789 MIR1227
nsv578382	Chr.19:2194897 - 2260362 on Build GRCh38	Loss	JSRP1 PLEKHJ1 MIR4321 SF3A2 LOC105372239 DOT1L MIR6789 MIR1227 AMH
dgv6218n54	Chr.19:2221793 - 2336009 on Build GRCh38	Loss	C19orf35 JSRP1 MIR4321 LINGO3 LOC105372239 SPPL2B MIR6789 AMH LSM7 PLEKHJ1 SF3A2 DOT1L MIR1227 OAZ1
nsv833706	Chr.19:2131211 - 2249764 on Build GRCh38	Loss	PLEKHJ1 SF3A2 AP3D1 LOC105372239 DOT1L MIR6789 MIR1227 AMH
nsv578383	Chr.19:2214058 - 2285197 on Build GRCh38	Loss	C19orf35 JSRP1 PLEKHJ1 MIR4321 SF3A2 LOC105372239 DOT1L MIR6789 MIR1227 AMH OAZ1
nsv833707	Chr.19:2187092 - 2372223 on Build GRCh38	Loss	C19orf35 JSRP1 MIR4321 LINGO3 LOC105372239 SPPL2B MIR6789 AMH LSM7 PLEKHJ1 SF3A2 DOT1L MIR1227 OAZ1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

mRNA 3'-splice site recognition
mRNA splicing, via spliceosome
mRNA processing
RNA splicing
positive regulation of neuron projection development

Function(s)

protein binding
zinc ion binding
poly(A) RNA binding