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See other LYSMD1 CNV Assays ›
Gene Symbol
LYSMD1
Assay Reference Genome
Location

Chr.1:151159656 on build GRCh38
Cytoband
1q21.3
Assay ID Hs00351827_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
Your Price
Online offer: 441.65
441.65
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Assay Details

Target Gene Details

Entrez Gene ID:

 388695

Gene Name:

 LysM domain containing 1

Gene Aliases:

 SB145

Location:

 Chr.1:151148496-151165948 on Build GRCh38

Assay Gene Location:
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LYSMD1

Target Gene Details

Entrez Gene ID:

 79626

Gene Name:

 TNF alpha induced protein 8 like 2

Gene Aliases:

 TIPE2

Location:

 Chr.1:151156629-151159749 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFAIP8L2 NM_024575.4 2 1085 NP_078851.2
AF271774.1 2 1066 AAG44785.1
AK027120.1 2 1061 BAB15664.1
AL833373.1 1 3006 CAI46145.1
BC063014.1 2 1037 AAH63014.1

Target Gene Details

Entrez Gene ID:

 100534012

Gene Name:

 TNFAIP8L2-SCNM1 readthrough

Gene Aliases:

 -

Location:

 Chr.1:151156629-151170297 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFAIP8L2-SCNM1 NM_001204848.1 NP_001191777.1
BG531092.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv522840 Chr.1:150961247 - 151375270 on Build GRCh38 Gain SCNM1 VPS72 GBAT2 FAM63A TMOD4 SEMA6C CERS2 PSMD4 MLLT11 LYSMD1 C1orf56 ZNF687 GABPB2 PIP5K1A LOC100507670 RFX5 SELENBP1 ANXA9 SETDB1 TNFAIP8L2-SCNM1 TNFAIP8L2 BNIPL PI4KB CDC42SE1 PRUNE1
dgv2n68 Chr.1:151136983 - 151309302 on Build GRCh38 Loss SCNM1 VPS72 LOC100507670 TNFAIP8L2-SCNM1 ZNF687 TNFAIP8L2 TMOD4 SEMA6C PSMD4 PI4KB LYSMD1 PIP5K1A

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More Information


Set Membership:

 Intragenic Exonic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Function(s) Process(es)


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