Hs00357632_cn

• Gene Symbol: GBAS
• Assay Reference Genome Location: Chr.7:55999362 on build GRCh38
• Cytoband: 7p11.2

Target Gene Details

• Entrez Gene ID: 2631
• Gene Name: glioblastoma amplified sequence
• Gene Aliases: NIPSNAP2
• Location: Chr.7:55964577-56000182 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GBAS	NM_001202469.1	8	1067	NP_001189398.1
	NM_001483.2	10	1184	NP_001474.1
	AF029786.1	10	1159	AAC29002.1
	AJ001259.1	10	1151	CAA04633.1
	AK097049.1	8	1053
	AK125036.1	7	3440
	BC000732.2	10	1157	AAH00732.1
	BC001837.2	10	1157	AAH01837.1
	BC030821.1	10	1166	AAH30821.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3613258	Chr.7:55963379 - 56119128 on Build GRCh38	Gain	CCT6A SNORA15 SUMF2 PHKG1 NUPR2 CHCHD2 PSPH GBAS
esv2761334	Chr.7:55755888 - 56357046 on Build GRCh38	Gain	MRPS17 CCT6A SNORA15 ZNF713 SEPT14 SUMF2 PSPHP1 PHKG1 NUPR2 CHCHD2 PSPH GBAS
dgv1201e199	Chr.7:55674375 - 56426809 on Build GRCh38	Deletion	MRPS17 LOC101060341 ZNF713 SEPT14 LOC650226 PSPHP1 PHKG1 NUPR2 CCT6A LOC107986800 SNORA15 FKBP9P1 SUMF2 CHCHD2 PSPH GBAS
nsv1019400	Chr.7:55642134 - 56026847 on Build GRCh38	Gain	MRPS17 LOC101060341 FKBP9P1 ZNF713 SEPT14 PSPHP1 PSPH GBAS
dgv6362n100	Chr.7:55894466 - 56026847 on Build GRCh38	Gain	MRPS17 ZNF713 PSPH GBAS
nsv1017793	Chr.7:55983574 - 56030337 on Build GRCh38	Gain	PSPH GBAS
esv28230	Chr.7:55552107 - 56317719 on Build GRCh38	Gain+Loss	MRPS17 LOC101060341 ZNF713 SEPT14 PSPHP1 PHKG1 NUPR2 CCT6A SNORA15 FKBP9P1 SUMF2 CHCHD2 PSPH VOPP1 GBAS
esv2734448	Chr.7:55785310 - 57103280 on Build GRCh38	Deletion	MRPS17 MIR4283-1 ZNF713 SEPT14 LOC650226 PHKG1 NUPR2 CCT6A LOC107986800 SNORA15 LOC401357 LOC100287294 SUMF2 LOC100240728 LOC101928401 DKFZp434L192 CHCHD2 LOC100130849 PSPH GBAS
esv3613248	Chr.7:55667080 - 56415551 on Build GRCh38	Gain	MRPS17 LOC101060341 ZNF713 SEPT14 PSPHP1 PHKG1 NUPR2 CCT6A LOC107986800 SNORA15 FKBP9P1 SUMF2 CHCHD2 PSPH GBAS
esv2734447	Chr.7:55664175 - 56422045 on Build GRCh38	Deletion	MRPS17 LOC101060341 ZNF713 SEPT14 PSPHP1 PHKG1 NUPR2 CCT6A LOC107986800 SNORA15 FKBP9P1 SUMF2 CHCHD2 PSPH GBAS

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

oxidative phosphorylation
ATP biosynthetic process
negative regulation of ATP citrate synthase activity

Function(s)

protein binding