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See other BSG CNV Assays ›
Gene Symbol
BSG
Assay Reference Genome
Location

Chr.19:577899 on build GRCh38
Cytoband
19p13.3
Assay ID Hs00376417_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 682

Gene Name:

 basigin (Ok blood group)

Gene Aliases:

 5F7, CD147, EMMPRIN, OK, TCSF

Location:

 Chr.19:571277-583493 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BSG NM_001322243.1 NP_001309172.1
NM_001728.3 2 374 NP_001719.2
NM_198589.2 NP_940991.1
NM_198590.2 NP_940992.1
NM_198591.2 NP_940993.1
XM_017027173.1 2 263 XP_016882662.1
AB072923.1 BAB88938.1
AB085790.1 BAC76828.1
AB091680.1 BAC67168.1
AF548371.1 2 253 AAN40694.1
AK296858.1
AK297880.1 2 232
AK302231.1
AY358113.1 2 245 AAQ88480.1
BC009040.2 AAH09040.1
BG480530.1
BI464857.1
CB153773.1
D45131.1 BAA08109.1
DA007913.1
GU557064.1
GU557065.1
L10240.1 AAA68936.1
L20471.1 AAB41120.1
M87879.1 AAA91084.1
X64364.1 CAA45716.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain LOC101929060 GZMM MADCAM1 CDC34 PRSS57 SHC2 THEG TPGS1 HCN2 PLPP2 BSG FSTL3 RNF126 ODF3L2 MIER2 C2CD4C FGF22 POLRMT
esv3643355 Chr.19:572192 - 582084 on Build GRCh38 Gain BSG
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain LOC101929060 MISP LOC101928450 GZMM MADCAM1 CDC34 PRSS57 SHC2 THEG TPGS1 HCN2 BSG FSTL3 PALM RNF126 ODF3L2 MIER2 C2CD4C FGF22 POLRMT
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion MISP LOC101928450 CDC34 GRIN3B THEG ELANE TPGS1 BSG FSTL3 MED16 MIR3187 ODF3L2 ARHGAP45 MIR4745 KISS1R WDR18 ARID3A ABCA7 RNU6-9 PLPPR3 GZMM MADCAM1 POLR2E R3HDM4 PRSS57 SHC2 AZU1 HCN2 PTBP1 GPX4 RNU6-2 PALM RNF126 LOC105372235 PRTN3 CFD TMEM259 CNN2 C2CD4C FGF22 POLRMT
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss MISP LOC101928450 CDC34 GRIN3B ELANE TPGS1 BSG FSTL3 MED16 MIR3187 ODF3L2 MIR4745 KISS1R WDR18 ARID3A RNU6-9 PLPPR3 GZMM MADCAM1 R3HDM4 PRSS57 SHC2 AZU1 HCN2 PTBP1 PALM RNF126 LOC105372235 PRTN3 CFD C2CD4C FGF22 POLRMT
nsv578152 Chr.19:572860 - 583812 on Build GRCh38 Gain BSG

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