Hs00382294_cn

• Gene Symbol: OCLN
• Assay Reference Genome Location: Chr.5:69492553 on build GRCh38
• Cytoband: 5q13.2

Target Gene Details

• Entrez Gene ID: 100506658
• Gene Name: occludin
• Gene Aliases: BLCPMG, PPP1R115
• Location: Chr.5:69492292-69558104 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
OCLN	NM_002538.3	1	262	NP_002529.1
	XM_017008914.1			XP_016864403.1
	U49184.1			AAC50451.1
	U53823.1	1	262	AAB00195.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3570182	Chr.5:69457781 - 69533508 on Build GRCh38	Loss	LOC101928924 OCLN
nsv1034024	Chr.5:69464444 - 69822296 on Build GRCh38	Gain	LOC101928924 GTF2H2C LOC728488 GUSBP3 OCLN
nsv821643	Chr.5:69272838 - 71076658 on Build GRCh38	Loss	LOC441081 GTF2H2 LOC728526 GTF2H2C SMN2 SMN1 LOC728488 SMA5 CCDC125 LOC647859 LOC107986351 AK6 TAF9 NAIP OCLN RAD17 SERF1B LOC101929599 LOC653080 SMA4 CDK7 LOC107986354 LOC101928924 MARVELD2 GUSBP3 SERF1A GTF2H2B
nsv1023116	Chr.5:69448480 - 69571455 on Build GRCh38	Gain	LOC101928924 GTF2H2C OCLN
nsv428117	Chr.5:69347454 - 71500057 on Build GRCh38	Gain+Loss	LOC441081 GTF2H2 LOC728526 GTF2H2C SMN2 SMN1 LOC728488 SMA5 LOC647859 LOC107986351 LOC102724392 AK6 TAF9 PMCHL2 NAIP OCLN RAD17 LOC107986353 SERF1B LOC101929599 LOC653080 SMA4 LOC107986354 LOC101928924 BDP1 MARVELD2 GUSBP9 GUSBP3 SERF1A GTF2H2B LOC107986352

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

general transcription factor

Gene Ontology Categories:

Process(es)

protein complex assembly
methylation
cell-cell junction organization
S-adenosylhomocysteine metabolic process
S-adenosylmethionine metabolic process
bicellular tight junction assembly

Function(s)

protein binding
thiopurine S-methyltransferase activity
protein domain specific binding