Genomic Map
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Target Gene Details
Entrez Gene ID: | 162073 |
Gene Name: | inositol 1,4,5-trisphosphate receptor interacting protein-like 2 |
Gene Aliases: |
- |
Location: |
Chr.16:19113932-19121630 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ITPRIPL2 | NM_001034841.3 | 1 | 879 | NP_001030013.1 |
| NR_028028.1 | 2 | 363 | ||
| AK096327.1 | 2 | 363 | ||
| AK097274.1 | 1 | 325 | ||
| BC101749.1 | 1 | 428 | AAI01750.1 | |
| BC101751.1 | 1 | 428 | AAI01752.1 | |
| BX335323.2 | 1 | 832 | ||
| BX338638.2 | 1 | 822 | ||
| BX382445.2 | 1 | 859 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv2787n100 | Chr.16:18870180 - 19117453 on Build GRCh38 | Gain |
 SMG1
COQ7
ITPRIPL2
LOC102723385
TMC7
|
| nsv571579 | Chr.16:18793415 - 19238897 on Build GRCh38 | Gain |
SMG1
COQ7
ITPRIPL2
ARL6IP1
SYT17
LOC102723385
TMC7
|
| nsv571582 | Chr.16:19038056 - 19790801 on Build GRCh38 | Gain |
KNOP1
COQ7
IQCK
ITPRIPL2
C16orf62
TMC5
SYT17
GDE1
CLEC19A
CCP110
LOC102723385
TMC7
|
| nsv1045019 | Chr.16:18924787 - 19245673 on Build GRCh38 | Gain |
SMG1
COQ7
ITPRIPL2
SYT17
LOC102723385
TMC7
|
| esv2758634 | Chr.16:17440243 - 19147984 on Build GRCh38 | Gain+Loss |
LOC105376752
SMG1
ITPRIPL2
TMC7
MIR3670-3
ABCC6P1
MIR3180-3
COQ7
RPS15A
MIR3179-3
MIR6770-3
ARL6IP1
MIR6511A4
NPIPA8
NOMO2
LOC102723728
LOC102723385
MIR3670-4
MIR3179-4
XYLT1
|
| nsv436835 | Chr.16:18930652 - 21500976 on Build GRCh38 | Insertion |
ANKS4B
ACSM2A
IQCK
ITPRIPL2
LOC81691
SNX29P1
DCUN1D3
TMC7
KNOP1
ZP2
TMEM159
SYT17
GPRC5B
GDE1
CLEC19A
CCP110
GPR139
UMOD
ACSM2B
CRYM
THUMPD1
LOC100190986
C16orf62
SMG1P3
DNAH3
PDILT
CRYM-AS1
ACSM3
ACSM1
NPIPB3
LYRM1
COQ7
TMC5
GP2
ERI2
LOC102723385
ACSM5
|
| esv3570409 | Chr.16:18759489 - 19177870 on Build GRCh38 | Gain |
SMG1
COQ7
RPS15A
ITPRIPL2
ARL6IP1
SYT17
LOC102723385
TMC7
|
| nsv1051531 | Chr.16:19004112 - 19117453 on Build GRCh38 | Gain |
COQ7
ITPRIPL2
LOC102723385
TMC7
|
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Additional Information:
For this assay, SNP(s) [rs76086024] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
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