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See other ATP2B2 CNV Assays ›
Gene Symbol
ATP2B2
Assay Reference Genome
Location

Chr.3:10328348 on build GRCh38
Cytoband
3p25.3
Assay ID Hs00415914_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 491

Gene Name:

 ATPase plasma membrane Ca2+ transporting 2

Gene Aliases:

 PMCA2, PMCA2a, PMCA2i

Location:

 Chr.3:10324023-10707962 on Build GRCh38

Assay Gene Location:

 Within Exon 32
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2B2 NM_001001331.2 23 4637 NP_001001331.1
NM_001683.3 20 4502 NP_001674.2
XM_005265179.4 25 4821 XP_005265236.1
XM_006713175.3 25 4705 XP_006713238.1
XM_011533752.2 23 4610 XP_011532054.1
XM_017006481.1 26 4948 XP_016861970.1
XM_017006482.1 23 4639 XP_016861971.1
XM_017006483.1 21 4649 XP_016861972.1
XM_017006484.1 23 4612 XP_016861973.1
XM_017006485.1 24 4916 XP_016861974.1
XM_017006486.1 25 4971 XP_016861975.1
XM_017006487.1 22 4569 XP_016861976.1
XM_017006488.1 22 4823 XP_016861977.1
XM_017006489.1 23 4745 XP_016861978.1
XM_017006490.1 21 4663 XP_016861979.1
XM_017006491.1 22 4835 XP_016861980.1
XM_017006492.1 24 4830 XP_016861981.1
AB210008.1 20 4575
L00620.1 19 4081 AAA51893.1
L20977.1 22 4639 AAA50877.1
S95758.1 19 3766 AAA08376.1
X63575.1 22 4268 CAA45131.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion TAMM41 SLC6A1 LOC101927467 LINC00852 FANCD2 SEC13 HRH1 ATP2B2 TATDN2 GHRL IRAK2 LINC00606 MIR378B MIR885 SLC6A1-AS1 BRK1 ATP2B2-IT2 FANCD2OS VHL GHRLOS VGLL4 ATG7 SLC6A11
nsv508903 Chr.3:10275353 - 10401894 on Build GRCh38 Insertion MIR378B MIR885 LINC00852 SEC13 GHRLOS ATP2B2 TATDN2 GHRL
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion TAMM41 SLC6A1 LINC00606 MIR378B MIR885 VHL ATG7 LOC101927467 LINC00852 FANCD2 SEC13 CIDECP HRH1 ATP2B2 EMC3 TATDN2 GHRL IRAK2 SLC6A1-AS1 BRK1 LOC401052 ATP2B2-IT2 FANCD2OS GHRLOS FANCD2P2 VGLL4 SLC6A11
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion TAMM41 SLC6A1 LOC101927467 LINC00852 FANCD2 SEC13 HRH1 ATP2B2 TATDN2 GHRL IRAK2 LINC00606 MIR378B MIR885 SLC6A1-AS1 BRK1 ATP2B2-IT2 FANCD2OS VHL GHRLOS FANCD2P2 VGLL4 ATG7 SLC6A11
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion TAMM41 SLC6A1 LOC101927467 LINC00852 FANCD2 SEC13 HRH1 ATP2B2 TATDN2 GHRL IRAK2 LINC00606 MIR378B MIR885 SLC6A1-AS1 BRK1 ATP2B2-IT2 FANCD2OS VHL GHRLOS FANCD2P2 VGLL4 ATG7 SLC6A11
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion TAMM41 SLC6A1 EMC3-AS1 LINC00606 MIR378B MIR885 VHL ATG7 LOC101927467 LINC00852 FANCD2 SEC13 CIDECP HRH1 ATP2B2 EMC3 TATDN2 GHRL IRAK2 SLC6A1-AS1 BRK1 LOC401052 ATP2B2-IT2 FANCD2OS GHRLOS FANCD2P2 VGLL4 SLC6A11
nsv819083 Chr.3:10327806 - 10328399 on Build GRCh38 Loss ATP2B2

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