Hs00426523_cn

• Gene Symbol: SF3A2
• Assay Reference Genome Location: Chr.19:2244779 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 8175
• Gene Name: splicing factor 3a subunit 2
• Gene Aliases: PRP11, PRPF11, SAP62, SF3a66
• Location: Chr.19:2236817-2248679 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SF3A2	NM_007165.4			NP_009096.2
	AK314815.1
	BC004434.1			AAH04434.1
	BC009903.2			AAH09903.1
	BC015804.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv578382	Chr.19:2194897 - 2260362 on Build GRCh38	Loss	AMH MIR1227 MIR6789 MIR4321 SF3A2 JSRP1 LOC105372239 DOT1L PLEKHJ1
dgv6218n54	Chr.19:2221793 - 2336009 on Build GRCh38	Loss	MIR1227 OAZ1 MIR6789 MIR4321 JSRP1 LINGO3 DOT1L PLEKHJ1 AMH SF3A2 LOC105372239 LSM7 SPPL2B C19orf35
nsv833706	Chr.19:2131211 - 2249764 on Build GRCh38	Loss	AMH MIR1227 MIR6789 SF3A2 LOC105372239 AP3D1 DOT1L PLEKHJ1
nsv578383	Chr.19:2214058 - 2285197 on Build GRCh38	Loss	AMH MIR1227 OAZ1 MIR6789 MIR4321 SF3A2 JSRP1 LOC105372239 DOT1L PLEKHJ1 C19orf35
nsv833707	Chr.19:2187092 - 2372223 on Build GRCh38	Loss	MIR1227 OAZ1 MIR6789 MIR4321 JSRP1 LINGO3 DOT1L PLEKHJ1 AMH SF3A2 LOC105372239 LSM7 SPPL2B C19orf35

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

mRNA 3'-splice site recognition
mRNA splicing, via spliceosome
mRNA processing
RNA splicing
positive regulation of neuron projection development

Function(s)

protein binding
zinc ion binding
poly(A) RNA binding