Hs00437389_cn

• Gene Symbol: RORC
• Assay Reference Genome Location: Chr.1:151816688 on build GRCh38
• Cytoband: 1q21.3

Target Gene Details

• Entrez Gene ID: 6097
• Gene Name: RAR related orphan receptor C
• Gene Aliases: IMD42, NR1F3, RORG, RZR-GAMMA, RZRG, TOR
• Location: Chr.1:151806071-151832450 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RORC	NM_001001523.1			NP_001001523.1
	NM_005060.3			NP_005051.2
	XM_006711484.3			XP_006711547.2
	AB307696.1
	AK097994.1
	AK223137.1			BAD96857.1
	AK298460.1
	AK315662.1
	AL834219.1			CAD38900.1
	BC031554.1			AAH31554.1
	BC110571.2			AAI10572.1
	BI520481.1
	CR457436.1			CAG33717.1
	HQ692834.1
	U16997.1			AAA64751.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv516369	Chr.1:151807701 - 151847848 on Build GRCh38	Gain	LOC100132111 RORC THEM5 C2CD4D
nsv1010398	Chr.1:151789173 - 151818464 on Build GRCh38	Gain	RORC LINGO4 TDRKH

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

C4 zinc finger nuclear receptor

Gene Ontology Categories:

Process(es)

transcription initiation from RNA polymerase II promoter
xenobiotic metabolic process
regulation of glucose metabolic process
regulation of steroid metabolic process
intracellular receptor signaling pathway
circadian regulation of gene expression
cellular response to sterol
positive regulation of circadian rhythm
steroid hormone mediated signaling pathway
regulation of fat cell differentiation
positive regulation of transcription, DNA-templated
adipose tissue development
regulation of transcription involved in cell fate commitment
T-helper 17 cell differentiation

Function(s)

transcription factor activity, sequence-specific DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
protein binding
oxysterol binding
zinc ion binding
sequence-specific DNA binding
transcription factor activity, direct ligand regulated sequence-specific DNA binding