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See other ATXN2L CNV Assays ›
Gene Symbol
ATXN2L
Assay Reference Genome
Location

Chr.16:28830740 on build GRCh38
Cytoband
16p11.2
Assay ID Hs00439563_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 11273

Gene Name:

 ataxin 2 like

Gene Aliases:

 A2D, A2LG, A2LP, A2RP

Location:

 Chr.16:28823048-28837237 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 10 - Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATXN2L NM_001308230.1 NP_001295159.1
NM_007245.3 NP_009176.2
NM_017492.3 NP_059867.3
NM_145714.2 NP_663760.1
NM_148414.2 NP_680780.1
NM_148415.2 NP_680781.1
NM_148416.2 NP_680782.1
XM_005255061.1 XP_005255118.1
XM_005255062.1 XP_005255119.1
XM_005255063.3 XP_005255120.1
XM_005255064.1 XP_005255121.1
XM_005255065.1 XP_005255122.1
XM_005255066.1 XP_005255123.1
XM_005255067.1 XP_005255124.1
XM_005255068.1 XP_005255125.1
XM_005255069.1 XP_005255126.1
XM_005255070.1 XP_005255127.1
XM_005255071.1 XP_005255128.1
XM_005255074.1 XP_005255131.1
XM_005255075.1 XP_005255132.1
XM_005255076.1 XP_005255133.1
XM_005255077.1 XP_005255134.1
XM_006721007.1 XP_006721070.1
XM_006721008.1 XP_006721071.1
XM_006721009.1 XP_006721072.1
XM_006721010.2 XP_006721073.1
XM_006721011.1 XP_006721074.1
XM_006721012.3 XP_006721075.1
XM_011545719.2 XP_011544021.1
XM_011545721.2 XP_011544023.1
XM_011545722.1 XP_011544024.1
XM_017022891.1 XP_016878380.1
XM_017022892.1 XP_016878381.1
AF034373.1 AAC69607.1
AJ317970.1 CAC38068.1
AJ317971.2 CAC38069.3
AJ317972.2 CAC38070.3
AJ317973.2 CAC38071.3
AJ317974.2 CAC38072.3
AK289981.1
AY188334.1 AAO12056.1
AY188335.1 AAO12057.1
AY188336.1 AAO12058.1
AY188337.1 AAO12059.1
AY188338.1 AAO12060.1
BC068012.1 AAH68012.1
BC082760.1 AAH82760.1
BC136584.1
U70671.1 AAB19201.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4987n54 Chr.16:28824884 - 29032129 on Build GRCh38 Gain ATP2A1 ATP2A1-AS1 LAT ATXN2L MIR4517 SH2B1 MIR4721 NFATC2IP SPNS1 TUFM CD19 RABEP2
esv3892826 Chr.16:28814728 - 29032129 on Build GRCh38 Gain+Loss ATP2A1 ATP2A1-AS1 LAT ATXN2L MIR4517 SH2B1 MIR4721 NFATC2IP SPNS1 TUFM CD19 RABEP2
esv3638345 Chr.16:28824146 - 28839056 on Build GRCh38 Gain ATXN2L
esv2758640 Chr.16:28163817 - 29139232 on Build GRCh38 Gain+Loss ATP2A1 MIR4517 MIR4721 NPIPB9 SGF29 SULT1A1 SULT1A2 ATXN2L SH2B1 EIF3CL APOBR NPIPB8 CD19 NPIPB6 NPIP NUPR1 LOC101928215 MIR6862-2 IL27 SBK1 CLN3 SPNS1 MIR6862-1 RABEP2 ATP2A1-AS1 LAT RRN3P2 XPO6 NFATC2IP TUFM EIF3C
nsv518648 Chr.16:28826194 - 29032129 on Build GRCh38 Loss ATP2A1 ATP2A1-AS1 LAT ATXN2L MIR4517 SH2B1 MIR4721 NFATC2IP SPNS1 TUFM CD19 RABEP2
nsv1059555 Chr.16:28373144 - 29195838 on Build GRCh38 Gain ATP2A1 MIR4517 MIR4721 NPIPB9 SGF29 SULT1A1 SULT1A2 ATXN2L SH2B1 EIF3CL APOBR NPIPB8 CD19 NPIP NUPR1 LOC101928215 MIR6862-2 IL27 LOC107984832 CLN3 SPNS1 MIR6862-1 RABEP2 ATP2A1-AS1 LAT RRN3P2 NFATC2IP TUFM EIF3C
dgv2831n100 Chr.16:28812594 - 29032542 on Build GRCh38 Gain ATP2A1 ATP2A1-AS1 LAT ATXN2L MIR4517 SH2B1 MIR4721 NFATC2IP SPNS1 TUFM CD19 RABEP2
esv3570454 Chr.16:28799004 - 29032129 on Build GRCh38 Gain ATP2A1 ATP2A1-AS1 LAT ATXN2L MIR4517 SH2B1 MIR4721 NFATC2IP SPNS1 TUFM CD19 RABEP2
nsv571805 Chr.16:28824174 - 29032129 on Build GRCh38 Loss ATP2A1 ATP2A1-AS1 LAT ATXN2L MIR4517 SH2B1 MIR4721 NFATC2IP SPNS1 TUFM CD19 RABEP2
nsv1064483 Chr.16:28620264 - 28857362 on Build GRCh38 Loss ATXN2L SH2B1 MIR4721 MIR6862-2 NPIPB9 SULT1A1 NPIPB8 TUFM EIF3C

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