Hs00440738_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63202805 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3	4	1429	NP_060268.2
	AB055518.1	1	770	BAB62751.1
	AK000398.1	2	589	BAA91138.1
	AK095795.1	4	1147
	AK300073.1	2	1159
	AL834366.1	1	550	CAD39029.1
	BC003681.1	3	1103	AAH03681.1
	BC016920.2	1	846	AAH16920.2
	BC025264.1	1	966	AAH25264.1
	BC050284.1	4	1429	AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	LOC107985425 BIRC7 MIR3196 MIR124-3 YTHDF1 NKAIN4
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	ARFGAP1 LOC100130587 KCNQ2 COL20A1 EEF1A2 HELZ2 SRMS MIR3196 MIR124-3 FLJ16779 PPDPF NKAIN4 LOC102723788 LOC107985425 BIRC7 CHRNA4 FNDC11 PTK6 MIR4326 LOC100130152 YTHDF1
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	HAR1A HAR1B MIR124-3 LOC63930 YTHDF1
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	LOC107985425 BIRC7 MIR3196 YTHDF1 NKAIN4
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	HAR1A BHLHE23 LOC100130587 DIDO1 OGFR GMEB2 LINC01056 LOC107985428 COL20A1 EEF1A2 TCFL5 SRMS MIR124-3 NKAIN4 OGFR-AS1 GID8 PTK6 SLC17A9 HAR1B ARFGAP1 LINC00659 LINC00029 KCNQ2 COL9A3 HELZ2 MIR3196 FLJ16779 PPDPF MRGBP LOC102723788 LOC107985425 BIRC7 CHRNA4 FNDC11 MIR4326 DPH3P1 LOC100130152 LOC63930 YTHDF1
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	LOC107985425 BIRC7 MIR3196 MIR124-3 YTHDF1 NKAIN4

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding