Hs00442510_cn

• Gene Symbol: TRIM46
• Assay Reference Genome Location: Chr.1:155179852 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 80128
• Gene Name: tripartite motif containing 46
• Gene Aliases: GENEY, TRIFIC
• Location: Chr.1:155173714-155184971 on Build GRCh38
• Assay Gene Location: Within Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRIM46	NM_001256599.1	8	1696	NP_001243528.1
	NM_001256600.1	9	1640	NP_001243529.1
	NM_001256601.1	8	1527	NP_001243530.1
	NM_001282378.1	7	1424	NP_001269307.1
	NM_001282379.1	8	1686	NP_001269308.1
	NM_025058.4	8	1686	NP_079334.3
	NR_046327.1	9	1724
	NR_046329.1	10	1783
	NR_104150.1	9	1724
	XM_011510002.1	9	1629	XP_011508304.1
	XM_017002393.1	9	1800	XP_016857882.1
	AK026882.1	8	1597	BAB15580.1
	AK096158.1	8	1574
	AK128139.1	10	1783	BAC87293.1
	AK225075.1	8	1597
	AK296300.1	9	1636
	AK297318.1	7	1332
	AK304542.1	9	1568
	AK308075.1	8	1491
	AK309699.1	8	1527
	AK310429.1	11	1952
	AY251386.1	8	1506	AAP51206.1
	BC069416.1	9	1620	AAH69416.1
	BC069568.1	9	1620	AAH69568.1
	BC126372.1	9	1641

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv527682	Chr.1:155177242 - 155227671 on Build GRCh38	Gain	THBS3 MTX1 MIR92B TRIM46 MUC1 GBAP1
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	KRTCAP2 THBS3 MTX1 GBA MIR92B TRIM46 MUC1 FAM189B GBAP1 SCAMP3
nsv8447	Chr.1:155172153 - 155184461 on Build GRCh38	Gain	KRTCAP2 TRIM46
nsv1010146	Chr.1:155146620 - 155231273 on Build GRCh38	Gain	KRTCAP2 THBS3 MTX1 MIR92B TRIM46 MUC1 GBAP1
nsv547961	Chr.1:155109822 - 155225189 on Build GRCh38	Loss	KRTCAP2 THBS3 MTX1 MIR92B TRIM46 EFNA1 SLC50A1 MUC1 DPM3 GBAP1
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	RUSC1 CLK2 GBA MIR92B TRIM46 RUSC1-AS1 EFNA1 SLC50A1 MUC1 GBAP1 HCN3 KRTCAP2 THBS3 MTX1 PKLR FDPS LOC105371451 DPM3 FAM189B ASH1L SCAMP3

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s)

zinc ion binding