Hs00464275_cn

• Gene Symbol: KCNN3
• Assay Reference Genome Location: Chr.1:154708157 on build GRCh38
• Cytoband: 1q21.3

Target Gene Details

• Entrez Gene ID: 3782
• Gene Name: potassium calcium-activated channel subfamily N member 3
• Gene Aliases: KCa2.3, SK3, SKCA3, hSK3
• Location: Chr.1:154697462-154870278 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
KCNN3	NM_001204087.1	9	2374	NP_001191016.1
	NM_002249.5	8	2329	NP_002240.3
	NM_170782.2	8	1250	NP_740752.1
	AF031815.1	8	2301	AAC26099.1
	AF438203.1	8	1228	AAL40801.1
	AJ251016.1	8	2363	CAB61331.1
	AY049734.1	8	2100	AAL10706.1
	AY138900.1	8	1453	AAN46636.1
	AY258142.1	8	2033	AAP45947.1
	BC042147.1	8	1231	AAH42147.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv509491	Chr.1:154692639 - 154719309 on Build GRCh38	Insertion	KCNN3
nsv521887	Chr.1:154264094 - 154711630 on Build GRCh38	Gain	UBE2Q1-AS1 SHE CHRNB2 ADAR UBAP2L UBE2Q1 AQP10 HAX1 TDRD10 ATP8B2 KCNN3 IL6R LOC101928101
nsv547958	Chr.1:154596207 - 154828771 on Build GRCh38	Gain	KCNN3 ADAR

More Information

Additional Information:

For this assay, SNP(s) [rs201738401] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

voltage-gated ion channel

Gene Ontology Categories:

Process(es)

potassium ion transmembrane transport
positive regulation of protein targeting to mitochondrion

Function(s)

calmodulin binding
small conductance calcium-activated potassium channel activity