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See other ATP2B2 CNV Assays ›
Gene Symbol
ATP2B2
Assay Reference Genome
Location

Chr.3:10327167 on build GRCh38
Cytoband
3p25.3
Assay ID Hs00466228_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 491

Gene Name:

 ATPase plasma membrane Ca2+ transporting 2

Gene Aliases:

 PMCA2, PMCA2a, PMCA2i

Location:

 Chr.3:10324023-10707962 on Build GRCh38

Assay Gene Location:

 Within Exon 32
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2B2 NM_001001331.2 23 5818 NP_001001331.1
NM_001683.3 20 5683 NP_001674.2
XM_005265179.4 25 6002 XP_005265236.1
XM_006713175.3 25 5886 XP_006713238.1
XM_011533752.2 23 5791 XP_011532054.1
XM_017006481.1 26 6129 XP_016861970.1
XM_017006482.1 23 5820 XP_016861971.1
XM_017006483.1 21 5830 XP_016861972.1
XM_017006484.1 23 5793 XP_016861973.1
XM_017006485.1 24 6097 XP_016861974.1
XM_017006486.1 25 6152 XP_016861975.1
XM_017006487.1 22 5750 XP_016861976.1
XM_017006489.1 23 5926 XP_016861978.1
XM_017006491.1 22 6016 XP_016861980.1
XM_017006492.1 24 6011 XP_016861981.1
AA197323.1 1 188
AB210008.1 20 5756
BX489007.1 1 484

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion ATG7 VGLL4 FANCD2 LINC00606 SLC6A1-AS1 VHL LINC00852 MIR885 SLC6A11 SLC6A1 SEC13 BRK1 ATP2B2 MIR378B GHRL TAMM41 FANCD2OS TATDN2 IRAK2 ATP2B2-IT2 GHRLOS LOC101927467 HRH1
nsv508903 Chr.3:10275353 - 10401894 on Build GRCh38 Insertion SEC13 ATP2B2 MIR378B GHRL TATDN2 LINC00852 GHRLOS MIR885
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion ATG7 CIDECP FANCD2 MIR885 SLC6A1 SEC13 ATP2B2 LOC401052 GHRL TAMM41 IRAK2 ATP2B2-IT2 GHRLOS LOC101927467 VGLL4 LINC00606 SLC6A1-AS1 VHL LINC00852 FANCD2P2 SLC6A11 BRK1 MIR378B FANCD2OS TATDN2 EMC3 HRH1
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion ATG7 VGLL4 FANCD2 LINC00606 SLC6A1-AS1 VHL LINC00852 FANCD2P2 MIR885 SLC6A11 SLC6A1 SEC13 BRK1 ATP2B2 MIR378B GHRL TAMM41 FANCD2OS TATDN2 IRAK2 ATP2B2-IT2 GHRLOS LOC101927467 HRH1
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion ATG7 VGLL4 FANCD2 LINC00606 SLC6A1-AS1 VHL LINC00852 FANCD2P2 MIR885 SLC6A11 SLC6A1 SEC13 BRK1 ATP2B2 MIR378B GHRL TAMM41 FANCD2OS TATDN2 IRAK2 ATP2B2-IT2 GHRLOS LOC101927467 HRH1
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion ATG7 CIDECP FANCD2 MIR885 SLC6A1 SEC13 ATP2B2 LOC401052 GHRL TAMM41 IRAK2 ATP2B2-IT2 GHRLOS LOC101927467 VGLL4 EMC3-AS1 LINC00606 SLC6A1-AS1 VHL LINC00852 FANCD2P2 SLC6A11 BRK1 MIR378B FANCD2OS TATDN2 EMC3 HRH1

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