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See other GFER CNV Assays ›
Gene Symbol
GFER
Assay Reference Genome
Location

Chr.16:1986339 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00522289_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2671

Gene Name:

 growth factor, augmenter of liver regeneration

Gene Aliases:

 ALR, ERV1, HERV1, HPO, HPO1, HPO2, HSS

Location:

 Chr.16:1984149-1987749 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GFER NM_005262.2 3 999 NP_005253.3
BC002429.1 3 935 AAH02429.1
BC028348.2 3 926 AAH28348.2
U31176.1 3 840 AAA96390.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SNORA10 METTL26 WDR24 MLST8 RPL23AP5 HN1L LOC107987233 C1QTNF8 PDPK1 SPSB3 NPW PDIA2 LOC100287175 RAB40C SNORA64 RNPS1 TMEM8A DDX11L10 CCDC154 MRPL28 MIR940 LOC729652 LOC107984876 TSC2 LOC105371038 PRR35 MIR6511B1 LMF1 NHLRC4 ERVK13-1 NUBP2 MIR6767 UBE2I MIR3178 CEMP1 LOC105371047 HAGHL PGP HAGH FAM234A GNG13 TMEM204 HBA2 PKD1 RPS2 IGFALS MIR3180-5 LINC00235 JMJD8 NTN3 LOC105371184 ATP6V0C CLCN7 SSTR5-AS1 SNORA78 TPSD1 GFER TRAF7 STUB1 CASKIN1 LMF1-AS1 MIR5587 LOC100134368 TPSAB1 WDR90 TSR3 AXIN1 TBC1D24 TBL3 FBXL16 LOC105371049 RAB11FIP3 ARHGDIG TPSG1 HBQ1 SNRNP25 SLC9A3R2 SNHG19 FLJ42627 RAB26 EME2 DNASE1L2 CCNF NTHL1 CCDC78 RPL3L MIR3177 SYNGR3 BRICD5 TELO2 MIR662 FAHD1 LINC00254 WASIR2 NARFL E4F1 RHOT2 SNHG9 TPSB2 DECR2 HS3ST6 MRPS34 UNKL PRR25 RHBDF1 NDUFB10 ABCA17P HBZ MIR1225 RHBDL1 MCRIP2 AMDHD2 C16orf59 KCTD5 LOC105371046 RGS11 LUC7L CHTF18 IFT140 NPRL3 FAM173A MIR3677 PRSS29P MSRB1 MSLN HBA1 LOC106660606 PTX4 ZNF598 NOXO1 MIR3176 LOC652276 PIGQ RNF151 POLR3K CACNA1H CAPN15 C16orf91 HBM GNPTG METRN MAPK8IP3 MIR6768 PRSS27 SSTR5 NME3 MIR6859-4 SOX8 CRAMP1 ABCA3 LOC105371045 RPUSD1 MEIOB MPG WFIKKN1 LOC101929280 NME4 BAIAP3 ECI1 SNORD60 MIR4717 MIR4516
nsv521569 Chr.16:1971892 - 2035996 on Build GRCh38 Loss SYNGR3 GFER TBL3 SLC9A3R2 ZNF598 NPW NOXO1
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss SNORA10 SYNGR3 TBL3 ZNF598 NPW NOXO1 SNORA64 SNHG9 RNF151 SNORA78 GFER SLC9A3R2 NDUFB10 RPS2
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion SNORA10 RPL3L MIR1225 SYNGR3 MSRB1 TBL3 TSC2 LOC105371049 MIR6511B1 ZNF598 NPW NOXO1 SNORA64 SNHG9 RNF151 SNORA78 GFER HS3ST6 SLC9A3R2 NDUFB10 PKD1 NTHL1 MIR4516 RPS2
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion SNORA10 MIR1225 SYNGR3 TBL3 TSC2 LOC105371049 MIR6511B1 ZNF598 NPW NOXO1 SNORA64 SNHG9 RNF151 SNORA78 GFER SLC9A3R2 NDUFB10 PKD1 NTHL1 RPS2
nsv471070 Chr.16:1947613 - 2024218 on Build GRCh38 Gain SNORA10 RPL3L SYNGR3 TBL3 ZNF598 NPW NOXO1 SNORA64 SNHG9 RNF151 SNORA78 GFER NDUFB10 RPS2
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss SNHG9 RNF151 SYNGR3 SNORA78 GFER TBL3 SLC9A3R2 ZNF598 NPW NOXO1

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