Hs00526223_cn

• Gene Symbol: TM4SF19
• Assay Reference Genome Location: Chr.3:196323915 on build GRCh38
• Cytoband: 3q29

Target Gene Details

• Entrez Gene ID: 116211
• Gene Name: transmembrane 4 L six family member 19
• Gene Aliases: OCTM4
• Location: Chr.3:196323546-196338420 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TM4SF19	NM_001204897.1	5	686	NP_001191826.1
	NM_001204898.1	4	612	NP_001191827.1
	NM_138461.3	5	690	NP_612470.2
	AF192910.1	5	646	AAQ13824.1
	AK310209.1	5	656
	BC146985.1	5	591
	BC146993.1	5	591
	BC147021.1	5	591
	BC171870.1	4	513
	BP395549.1	2	130
	BP396791.1	2	131
	BQ678650.1	5	656
	CA430273.1	1	388
	CA489370.1	4	612

Target Gene Details

• Entrez Gene ID: 100874214
• Gene Name: TM4SF19 antisense RNA 1
• Gene Aliases: -
• Location: Chr.3:196318332-196325570 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TM4SF19-AS1	NR_046724.1	2	192
	AK124973.1	2	174

Target Gene Details

• Entrez Gene ID: 100534611
• Gene Name: TM4SF19-TCTEX1D2 readthrough (NMD candidate)
• Gene Aliases: -
• Location: Chr.3:196316085-196338420 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TM4SF19-TCTEX1D2	NR_037950.1	5	690

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv997797	Chr.3:195931489 - 196486087 on Build GRCh38	Gain	RNF168 TCTEX1D2 TM4SF19-AS1 SDHAP1 LOC105374301 SLC51A TFRC ZDHHC19 UBXN7-AS1 PCYT1A UBXN7 TM4SF19-TCTEX1D2 LINC00885 TM4SF19
nsv1009811	Chr.3:196124925 - 196411200 on Build GRCh38	Gain	UBXN7 TM4SF19-TCTEX1D2 TCTEX1D2 TM4SF19-AS1 SLC51A LINC00885 ZDHHC19 TM4SF19 PCYT1A
nsv593071	Chr.3:196132016 - 196345571 on Build GRCh38	Gain	TM4SF19-TCTEX1D2 TCTEX1D2 TM4SF19-AS1 SLC51A LINC00885 ZDHHC19 TM4SF19 PCYT1A
nsv4183	Chr.3:196307196 - 196352238 on Build GRCh38	Deletion	UBXN7 TM4SF19-TCTEX1D2 TCTEX1D2 TM4SF19-AS1 TM4SF19
esv2759213	Chr.3:195382058 - 196344722 on Build GRCh38	Gain+Loss	LOC105374297 MIR6829 ACAP2 TCTEX1D2 TM4SF19-AS1 MIR570 SDHAP1 LOC105374301 SLC51A TNK2 TFRC ZDHHC19 MUC20 SDHAP2 PCYT1A TM4SF19-TCTEX1D2 APOD LOC101929697 PPP1R2 LINC00969 LINC00885 MUC4 TM4SF19 LOC105374299

More Information

• Set Membership: Intragenic, Exonic, DGV Variation