Genomic Map
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Target Gene Details
Entrez Gene ID: | 4927 |
Gene Name: | nucleoporin 88 |
Gene Aliases: |
- |
Location: |
Chr.17:5384833-5419739 on Build GRCh38 |
Assay Gene Location: | Within Exon 18 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| NUP88 | NM_001320653.1 | 17 | 3289 | NP_001307582.1 |
| NM_002532.5 | 17 | 3241 | NP_002523.2 | |
| BQ937933.1 | 1 | 348 |
Target Gene Details
Entrez Gene ID: | 9135 |
Gene Name: | rabaptin, RAB GTPase binding effector protein 1 |
Gene Aliases: |
RAB5EP, RABPT5 |
Location: |
Chr.17:5282263-5386340 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| RABEP1 | NM_001083585.2 | 17 | 4771 | NP_001077054.1 |
| NM_001291581.1 | 17 | 4741 | NP_001278510.1 | |
| NM_004703.5 | 18 | 4870 | NP_004694.2 | |
| XM_011524060.1 | 19 | 4936 | XP_011522362.1 | |
| XM_017025294.1 | 17 | 4463 | XP_016880783.1 | |
| XM_017025295.1 | 16 | 4397 | XP_016880784.1 | |
| AL050211.1 | 1 | 204 | ||
| AL157499.1 | 1 | 1606 | ||
| BC041700.1 | 18 | 4836 | AAH41700.1 | |
| EB387308.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain |
 PSMB6
C1QBP
C17orf107
MED11
TM4SF5
MINK1
GP1BA
DHX33
VMO1
LOC400568
CHRNE
RNF167
MIR6865
CXCL16
INCA1
PLD2
LOC100130950
SLC52A1
LOC102724009
KIF1C
ZNF232
SCIMP
PFN1
SPAG7
SLC25A11
ZMYND15
NUP88
ENO3
RABEP1
LOC107984973
LOC101559451
ZFP3
CAMTA2
ARRB2
LOC101928000
USP6
ZNF594
GLTPD2
ALOX15
PELP1
RPAIN
MIR6864
LOC101927979
SMTNL2
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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