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See other GFER CNV Assays ›
Gene Symbol
GFER
Assay Reference Genome
Location

Chr.16:1987524 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00551621_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2671

Gene Name:

 growth factor, augmenter of liver regeneration

Gene Aliases:

 ALR, ERV1, HERV1, HPO, HPO1, HPO2, HSS

Location:

 Chr.16:1984149-1987749 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GFER NM_005262.2 3 2184 NP_005253.3
BC002429.1 3 2120 AAH02429.1
BC028348.2 3 2111 AAH28348.2
U31176.1 3 2025 AAA96390.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication HBA1 TPSAB1 PDPK1 RPL3L POLR3K LOC105371049 BRICD5 ABCA17P MSRB1 LOC105371184 PRR35 LINC00254 MAPK8IP3 LUC7L PRSS27 PIGQ HBZ LOC107984876 MIR6859-4 MIR4516 EME2 WDR24 RAB40C FBXL16 CHTF18 DNASE1L2 PGP MRPL28 NPRL3 MPG IFT140 RAB11FIP3 C16orf91 MEIOB LOC652276 TSR3 ZNF598 LOC105371046 GFER PKD1 SSTR5 E4F1 C16orf59 GNPTG LOC107987233 UNKL SOX8 HBQ1 ERVK13-1 RHBDF1 CCDC154 NDUFB10 KCTD5 TMEM204 NTHL1 WFIKKN1 LOC106660606 IGFALS LMF1-AS1 METRN RNF151 PDIA2 DECR2 MCRIP2 ARHGDIG WASIR2 LOC105371047 HAGH PTX4 C1QTNF8 MIR3180-5 SNORA78 METTL26 PRSS29P FAM173A TPSB2 SSTR5-AS1 RHBDL1 TMEM8A SLC9A3R2 TELO2 HN1L NOXO1 ABCA3 LINC00235 SPSB3 NPW MIR4717 NME4 ATP6V0C GNG13 TBC1D24 LOC100134368 LOC101929280 CACNA1H ECI1 TPSG1 TPSD1 SNHG9 CCNF BAIAP3 RPUSD1 HBM SNORD60 MIR5587 FAM234A SNHG19 CAPN15 MIR6511B1 PRR25 MRPS34 HAGHL RAB26 RNPS1 NUBP2 MIR662 JMJD8 TRAF7 TSC2 STUB1 LOC100287175 CRAMP1 MIR6768 HBA2 SNRNP25 TBL3 RPL23AP5 SYNGR3 RGS11 AMDHD2 SNORA64 CASKIN1 MSLN MIR3178 MIR1225 MIR6767 LOC105371045 LMF1 HS3ST6 NTN3 MIR3176 MIR940 LOC729652 WDR90 CEMP1 RHOT2 FAHD1 MIR3177 CCDC78 SNORA10 RPS2 MIR3677 NARFL AXIN1 DDX11L10 FLJ42627 CLCN7 LOC105371038 UBE2I NHLRC4 NME3 MLST8
nsv521569 Chr.16:1971892 - 2035996 on Build GRCh38 Loss NOXO1 SYNGR3 NPW ZNF598 TBL3 SLC9A3R2 GFER
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss NOXO1 RNF151 NPW ZNF598 TBL3 NDUFB10 GFER SNORA10 RPS2 SYNGR3 SNORA78 SNORA64 SNHG9 SLC9A3R2
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion MIR4516 NOXO1 HS3ST6 RNF151 TSC2 NPW RPL3L ZNF598 TBL3 NDUFB10 LOC105371049 MIR6511B1 GFER SNORA10 PKD1 RPS2 SYNGR3 SNORA78 MSRB1 SNORA64 NTHL1 SNHG9 SLC9A3R2 MIR1225
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NOXO1 RNF151 TSC2 NPW ZNF598 TBL3 NDUFB10 LOC105371049 MIR6511B1 GFER SNORA10 PKD1 RPS2 SYNGR3 SNORA78 SNORA64 NTHL1 SNHG9 SLC9A3R2 MIR1225
nsv471070 Chr.16:1947613 - 2024218 on Build GRCh38 Gain NOXO1 RNF151 NPW RPL3L ZNF598 TBL3 NDUFB10 GFER SNORA10 RPS2 SYNGR3 SNORA78 SNORA64 SNHG9
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss NOXO1 SYNGR3 SNORA78 RNF151 NPW ZNF598 TBL3 SNHG9 SLC9A3R2 GFER

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