Hs00564382_cn

• Gene Symbol: DDX28
• Assay Reference Genome Location: Chr.16:68022305 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 55794
• Gene Name: DEAD-box helicase 28
• Gene Aliases: MDDX28
• Location: Chr.16:68021274-68023867 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DDX28	NM_018380.3	1	1563	NP_060850.2
	AK002144.1	1	1138	BAA92106.1
	BC024273.1	1	905	AAH24273.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2666619	Chr.16:68003989 - 68045407 on Build GRCh38	Deletion	DDX28 DUS2 LOC100131303
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	ELMO3 PLEKHG4 TPPP3 NOL3 SLC12A4 TMEM208 HSF4 RANBP10 ENKD1 NRN1L MIR328 LOC107984813 KIAA0895L KCTD19 AGRP ATP6V0D1 CENPT ZDHHC1 EDC4 PARD6A LOC105369155 SLC9A5 HSD11B2 DPEP2 LOC100131303 CARMIL2 GFOD2 LRRC29 E2F4 THAP11 FAM65A TSNAXIP1 DPEP3 PSMB10 EXOC3L1 DUS2 LOC100505942 DDX28 C16orf86 NUTF2 LRRC36 LCAT CTRL FBXL8 CTCF PSKH1 TRADD ACD FHOD1
esv3638897	Chr.16:68004075 - 68045657 on Build GRCh38	Loss	DDX28 DUS2 LOC100131303
esv3638900	Chr.16:68008886 - 68035332 on Build GRCh38	Gain	DDX28 DUS2 LOC100131303
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	ELMO3 PLEKHG4 TPPP3 NOL3 SLC12A4 TMEM208 HSF4 RANBP10 ENKD1 NRN1L MIR328 LOC107984813 KIAA0895L C16orf70 KCTD19 AGRP ATP6V0D1 CENPT ZDHHC1 EDC4 PARD6A LOC105369155 SLC9A5 HSD11B2 DPEP2 LOC100131303 CARMIL2 GFOD2 LRRC29 E2F4 THAP11 FAM65A TSNAXIP1 DPEP3 PSMB10 EXOC3L1 DUS2 LOC100505942 DDX28 C16orf86 NUTF2 LRRC36 B3GNT9 LCAT CTRL FBXL8 CTCF PSKH1 TRADD ACD FHOD1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

RNA secondary structure unwinding
mitochondrial large ribosomal subunit assembly

Function(s)

ATP-dependent RNA helicase activity
ATP binding
rRNA binding
poly(A) RNA binding