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See other HAGHL CNV Assays ›
Gene Symbol
HAGHL
Assay Reference Genome
Location

Chr.16:728879 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00564945_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84264

Gene Name:

 hydroxyacylglutathione hydrolase-like

Gene Aliases:

 -

Location:

 Chr.16:726936-729746 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HAGHL NM_001290137.1 NP_001277066.1
NM_001290139.1 NP_001277068.1
NM_001323635.1 NP_001310564.1
NM_001323636.1 NP_001310565.1
NM_032304.3 NP_115680.1
XM_005255631.4 7 824 XP_005255688.1
XM_005255632.1 XP_005255689.1
XM_011522711.1 7 752 XP_011521013.1
XM_011522712.1 XP_011521014.1
XM_017023773.1 7 712 XP_016879262.1
XM_017023774.1 XP_016879263.1
AA489499.1
AB209331.1 BAD92568.1
AK054841.1 6 831 BAB70814.1
AK098340.1
AK293575.1
BC004353.1 AAH04353.1
BC015008.1 AAH15008.1
BC033796.1 7 865 AAH33796.1
BG469685.1
BG821643.1
BI333301.1
BI834617.1
BQ067068.1
CD050886.1
EL736395.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss LOC105371184 WDR90 FAM173A LOC100287175 FBXL16 JMJD8 RHOT2 WFIKKN1 METRN NARFL WDR24 METTL26 RHBDL1 RAB40C STUB1 MCRIP2 LOC105371038 CCDC78 HAGHL
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication BAIAP3 MIR4516 LOC107987233 IGFALS ATP6V0C LOC652276 HBQ1 C16orf59 STUB1 MIR4717 SSTR5-AS1 DNASE1L2 TRAF7 SSTR5 MRPL28 LMF1 NPW JMJD8 RHOT2 TPSB2 LOC729652 FAHD1 CCNF NOXO1 HN1L SNHG19 METTL26 LOC105371046 HBA2 NTHL1 SNORA78 SNRNP25 PRR35 SPSB3 CHTF18 MIR6768 SNORA10 PDPK1 TBL3 NDUFB10 NARFL FAM234A TMEM204 PDIA2 TPSD1 LOC105371049 NHLRC4 DDX11L10 LOC100134368 HS3ST6 NME3 RHBDF1 NME4 LOC106660606 HAGHL TMEM8A HAGH MIR1225 ABCA17P HBM MIR5587 RPL3L SOX8 WDR24 MLST8 ABCA3 ZNF598 RHBDL1 PGP LOC105371047 TELO2 MIR6859-4 MCRIP2 KCTD5 RGS11 ECI1 TSC2 MIR6767 MIR940 CACNA1H FAM173A LOC100287175 CRAMP1 METRN SNORD60 HBZ MSLN MSRB1 PIGQ GNPTG UBE2I PRSS29P RAB40C RPL23AP5 LMF1-AS1 GFER BRICD5 MIR3176 CCDC78 SNORA64 LUC7L PRSS27 WDR90 C16orf91 MIR3677 LINC00254 NPRL3 POLR3K E4F1 MRPS34 LINC00235 CEMP1 TBC1D24 ERVK13-1 LOC105371045 RPUSD1 ARHGDIG CAPN15 TSR3 DECR2 LOC105371184 PRR25 CCDC154 FLJ42627 GNG13 MIR6511B1 LOC107984876 AMDHD2 HBA1 WFIKKN1 MIR3177 SLC9A3R2 PKD1 LOC101929280 NUBP2 CASKIN1 CLCN7 PTX4 MIR3180-5 MEIOB RAB11FIP3 IFT140 MAPK8IP3 NTN3 MIR3178 AXIN1 FBXL16 RNF151 SNHG9 TPSG1 TPSAB1 RNPS1 RPS2 MIR662 SYNGR3 EME2 C1QTNF8 MPG LOC105371038 WASIR2 UNKL RAB26
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain LOC105371184 WDR90 FAM173A LOC100287175 FBXL16 JMJD8 RHOT2 WFIKKN1 METRN NARFL WDR24 METTL26 RHBDL1 STUB1 MCRIP2 LOC105371038 CCDC78 HAGHL
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss LOC105371184 WDR90 FAM173A FBXL16 JMJD8 RHOT2 METRN NARFL MSLN WDR24 RHBDL1 STUB1 CCDC78 HAGHL
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss LOC105371184 PRR25 FAM173A CHTF18 GNG13 LOC107987233 LOC100287175 WFIKKN1 METRN NARFL MSLN PIGQ NHLRC4 LOC101929280 RAB40C STUB1 MIR3176 RAB11FIP3 CCDC78 HAGHL WDR90 FBXL16 JMJD8 RHOT2 MIR5587 WDR24 METTL26 LINC00235 RHBDL1 MIR662 RPUSD1 MCRIP2 LOC105371038 CAPN15 PRR35
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss LOC105371184 WDR90 FAM173A CHTF18 GNG13 LOC100287175 FBXL16 JMJD8 RHOT2 METRN NARFL MSLN WDR24 RHBDL1 MIR662 STUB1 RPUSD1 MCRIP2 LOC105371038 CCDC78 HAGHL
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss LOC105371184 PRR25 FAM173A CHTF18 GNG13 LOC107987233 LOC100287175 WFIKKN1 METRN NARFL MSLN PIGQ NHLRC4 LOC101929280 RAB40C STUB1 MIR3176 RAB11FIP3 CCDC78 HAGHL WDR90 FBXL16 JMJD8 RHOT2 MIR5587 WDR24 METTL26 LINC00235 RHBDL1 MIR662 RPUSD1 MCRIP2 LOC105371038 CAPN15 PRR35
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss FAM173A FBXL16 JMJD8 STUB1 METRN CCDC78 HAGHL NARFL MSLN WDR24
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LOC105371184 PRR25 FAM173A CHTF18 GNG13 LOC107987233 LOC100287175 LOC107984876 WFIKKN1 METRN NARFL MSLN PIGQ NHLRC4 LOC101929280 RAB40C LMF1-AS1 STUB1 SSTR5-AS1 MIR3176 SSTR5 RAB11FIP3 CCDC78 HAGHL WDR90 LMF1 FBXL16 JMJD8 RHOT2 MIR5587 SOX8 WDR24 METTL26 LINC00235 RHBDL1 MIR662 RPUSD1 C1QTNF8 MCRIP2 LOC105371038 CAPN15 PRR35
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss LOC105371184 WDR90 FAM173A LOC100287175 FBXL16 JMJD8 RHOT2 WFIKKN1 METRN NARFL WDR24 METTL26 PIGQ LOC101929280 RHBDL1 RAB40C STUB1 MCRIP2 LOC105371038 CCDC78 HAGHL
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication LOC105371184 FAM173A CHTF18 GNG13 LOC100287175 WFIKKN1 METRN NARFL MSLN PIGQ LOC101929280 RAB40C STUB1 CCDC78 HAGHL WDR90 FBXL16 JMJD8 RHOT2 WDR24 METTL26 RHBDL1 MIR662 RPUSD1 MCRIP2 LOC105371038
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication LOC105371184 PRR25 FAM173A CHTF18 GNG13 LOC107987233 LOC100287175 WFIKKN1 METRN NARFL MSLN PIGQ NHLRC4 LOC101929280 RAB40C STUB1 MIR3176 RAB11FIP3 CCDC78 HAGHL WDR90 FBXL16 JMJD8 RHOT2 MIR5587 WDR24 METTL26 LINC00235 RHBDL1 MIR662 RPUSD1 MCRIP2 LOC105371038 CAPN15 PRR35

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


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