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See other GFER CNV Assays ›
Gene Symbol
GFER
Assay Reference Genome
Location

Chr.16:1987219 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00566199_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2671

Gene Name:

 growth factor, augmenter of liver regeneration

Gene Aliases:

 ALR, ERV1, HERV1, HPO, HPO1, HPO2, HSS

Location:

 Chr.16:1984149-1987749 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GFER NM_005262.2 3 1879 NP_005253.3
BC002429.1 3 1815 AAH02429.1
BC028348.2 3 1806 AAH28348.2
U31176.1 3 1720 AAA96390.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SNORA64 MIR6768 PDIA2 NPRL3 MIR6511B1 LOC107987233 TSR3 CRAMP1 RNPS1 LOC105371045 SLC9A3R2 PTX4 MIR1225 MEIOB SNORA78 NHLRC4 KCTD5 JMJD8 TBL3 HAGH TMEM204 C16orf59 C16orf91 TPSD1 WASIR2 TSC2 E4F1 FAM173A TPSG1 TELO2 C1QTNF8 TMEM8A RAB40C CACNA1H NTHL1 LINC00254 ABCA17P NARFL MIR940 LOC105371184 NTN3 LOC101929280 IFT140 PRSS27 RPL3L ECI1 NME3 SOX8 LOC106660606 MPG RPL23AP5 GNG13 MIR3176 MRPL28 RHOT2 WFIKKN1 TRAF7 MSRB1 BAIAP3 LINC00235 BRICD5 NME4 NUBP2 RGS11 PDPK1 GFER PRSS29P ERVK13-1 ZNF598 LUC7L SSTR5 LOC100134368 SNRNP25 SNORD60 HBA2 UBE2I RHBDF1 DNASE1L2 ABCA3 CCDC78 RPS2 FAHD1 DECR2 MIR4516 TPSAB1 RAB11FIP3 LOC729652 MIR6767 CASKIN1 LOC105371047 RPUSD1 MAPK8IP3 LOC105371038 HBA1 CHTF18 RHBDL1 AMDHD2 DDX11L10 NDUFB10 MCRIP2 MRPS34 STUB1 SNORA10 MIR662 SSTR5-AS1 SNHG19 HBZ LOC100287175 FLJ42627 POLR3K FAM234A TBC1D24 MSLN RAB26 METTL26 NPW MIR3677 MIR3177 LOC652276 PIGQ PRR25 AXIN1 EME2 UNKL FBXL16 WDR24 GNPTG CLCN7 ATP6V0C PRR35 PKD1 CEMP1 LOC105371046 RNF151 METRN CAPN15 CCDC154 PGP MIR3180-5 MIR6859-4 NOXO1 TPSB2 HN1L LMF1-AS1 SNHG9 MIR5587 HS3ST6 CCNF MLST8 MIR4717 MIR3178 SPSB3 LOC107984876 LMF1 SYNGR3 IGFALS HBQ1 HBM HAGHL ARHGDIG WDR90 LOC105371049
nsv521569 Chr.16:1971892 - 2035996 on Build GRCh38 Loss SLC9A3R2 NOXO1 TBL3 SYNGR3 GFER ZNF598 NPW
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss NDUFB10 NOXO1 SNORA64 TBL3 SNHG9 SNORA10 RPS2 SLC9A3R2 SYNGR3 RNF151 GFER ZNF598 NPW SNORA78
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion NDUFB10 NOXO1 SNORA64 TBL3 SNHG9 SNORA10 HS3ST6 TSC2 RPS2 MIR6511B1 MIR4516 PKD1 MSRB1 SLC9A3R2 SYNGR3 RPL3L NTHL1 RNF151 MIR1225 GFER ZNF598 NPW SNORA78 LOC105371049
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion NDUFB10 NOXO1 SNORA64 TBL3 SNHG9 SNORA10 TSC2 RPS2 MIR6511B1 PKD1 SLC9A3R2 SYNGR3 NTHL1 RNF151 MIR1225 GFER ZNF598 NPW SNORA78 LOC105371049
nsv471070 Chr.16:1947613 - 2024218 on Build GRCh38 Gain NDUFB10 NOXO1 SNORA64 TBL3 SNHG9 SNORA10 RPS2 SYNGR3 RPL3L RNF151 GFER ZNF598 NPW SNORA78
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss SLC9A3R2 NOXO1 TBL3 SNHG9 SYNGR3 RNF151 GFER ZNF598 NPW SNORA78

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