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See other PAFAH1B3 CNV Assays ›
Gene Symbol
PAFAH1B3
Assay Reference Genome
Location

Chr.19:42300056 on build GRCh38
Cytoband
19q13.2
Assay ID Hs00580133_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5050

Gene Name:

 platelet activating factor acetylhydrolase 1b catalytic subunit 3

Gene Aliases:

 PAFAHG

Location:

 Chr.19:42297033-42302800 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PAFAH1B3 NM_001145939.1 NP_001139411.1
NM_001145940.1 NP_001139412.1
NM_002573.3 NP_002564.1
XM_017026846.1 XP_016882335.1
XM_017026847.1 XP_016882336.1
XM_017026848.1 XP_016882337.1
BC003016.1 AAH03016.1
BC007863.2 AAH07863.1
CR407626.1 CAG28554.1
D63391.1 BAA09706.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv520239 Chr.19:41853387 - 42426852 on Build GRCh38 Loss GSK3A ZNF574 PRR19 PAFAH1B3 CD79A LOC100505585 LIPE-AS1 CIC RABAC1 TMEM145 ATP1A3 GRIK5 MIR8077 ARHGEF1 LOC101930071 DEDD2 MIR6797 POU2F2 MIR4323 LIPE RPS19 ZNF526 MEGF8 LOC100505622 LOC390937 ERF CNFN
nsv526186 Chr.19:42172329 - 42699355 on Build GRCh38 Gain TMEM145 GSK3A MIR8077 LOC101930071 PRR19 DEDD2 CEACAM8 CXCL17 PAFAH1B3 POU2F2 LIPE LIPE-AS1 ZNF526 CIC MEGF8 CEACAM1 ERF CNFN
nsv1160627 Chr.19:42209979 - 42341899 on Build GRCh38 Deletion TMEM145 PAFAH1B3 GSK3A ZNF526 PRR19 CIC MEGF8 DEDD2 ERF
nsv953583 Chr.19:42242549 - 42312148 on Build GRCh38 Deletion PAFAH1B3 GSK3A PRR19 CIC ERF
nsv522854 Chr.19:41613927 - 42426852 on Build GRCh38 Gain GSK3A CEACAM6 LYPD4 ZNF574 CEACAM3 PRR19 PAFAH1B3 CEACAM7 CD79A LOC100505585 LIPE-AS1 CIC RABAC1 CEACAM5 CEACAM4 TMEM145 ATP1A3 GRIK5 MIR8077 ARHGEF1 LOC101930071 DEDD2 MIR6797 POU2F2 MIR4323 LIPE RPS19 ZNF526 DMRTC2 MEGF8 LOC100505622 LOC390937 ERF CNFN
nsv833834 Chr.19:42232292 - 42330875 on Build GRCh38 Loss TMEM145 PAFAH1B3 GSK3A PRR19 CIC MEGF8 ERF
esv2422471 Chr.19:42228989 - 43165333 on Build GRCh38 Deletion PSG8 TMEM145 PSG2 GSK3A PSG1 MIR8077 PSG3 LOC101930071 PRR19 PSG11 PSG10P CEACAM8 CXCL17 PAFAH1B3 LIPE PSG6 LIPE-AS1 CIC MEGF8 CEACAM1 LOC100289650 PSG7 ERF CNFN

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