Hs00580671_cn

• Gene Symbol: RAB40B
• Assay Reference Genome Location: Chr.17:82659629 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 10966
• Gene Name: RAB40B, member RAS oncogene family
• Gene Aliases: RAR, SEC4L
• Location: Chr.17:82657067-82698722 on Build GRCh38
• Assay Gene Location: Overlaps Intron 7 - Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAB40B	NM_006822.2			NP_006813.1
	XM_005256334.4			XP_005256391.1
	XM_006722271.3			XP_006722334.1
	XM_011523528.2			XP_011521830.1
	XM_017024042.1			XP_016879531.1
	XM_017024043.1			XP_016879532.1
	AB209711.1			BAD92948.1
	AK124376.1
	AL047483.1
	BC018039.1			AAH18039.1
	U05227.1			AAA17031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	LOC105371944 LOC105376791 LOC101929552 B3GNTL1 FOXK2 ZNF750 METRNL RAB40B FN3K MIR4525 FN3KRP TBCD WDR45B
esv3641436	Chr.17:82659688 - 82666055 on Build GRCh38	Loss	RAB40B
nsv1067362	Chr.17:82569201 - 82681793 on Build GRCh38	Gain	RAB40B MIR4525 FOXK2 WDR45B
nsv1062980	Chr.17:82408938 - 82687942 on Build GRCh38	Gain	RAB40B HEXDC OGFOD3 MIR4525 FOXK2 NARF C17orf62 WDR45B
esv3434025	Chr.17:82659687 - 82660885 on Build GRCh38	Duplication	RAB40B
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	ACTG1 MIR6787 DUS1L AATK PDE6G MAFG-AS1 ALYREF AATK-AS1 NARF PCYT2 UTS2R C17orf89 ANAPC11 PPP1R27 GPS1 CCDC57 FSCN2 HEXDC PYCR1 OGFOD3 ARL16 DCXR LOC105371944 P4HB LOC105376790 B3GNTL1 SNORD134 RAC3 FOXK2 SLC38A10 CEP131 SLC16A3 ARHGDIA MIR4525 HGS SLC25A10 NPLOC4 TBCD MIR6786 FASN LOC105376791 LRRC45 LOC100130370 TEPSIN NPB ASPSCR1 MIR3186 LINC00482 NOTUM CCDC137 CD7 CSNK1D MYADML2 LOC101929511 SIRT7 GCGR FAAP100 RFNG TSPAN10 MCRIP1 MRPL12 OXLD1 LOC101929552 MAFG MIR4740 TEX19 ZNF750 C17orf62 BAHCC1 RAB40B FN3K LOC105371925 FN3KRP TMEM105 SECTM1 STRA13 WDR45B
esv3380492	Chr.17:82659087 - 82660985 on Build GRCh38	Duplication	RAB40B
esv2762577	Chr.17:82244836 - 82838431 on Build GRCh38	Gain+Loss	LOC105376791 LOC105376790 LOC101929552 FOXK2 NARF UTS2R TEX19 ZNF750 C17orf62 CD7 RAB40B FN3K HEXDC CSNK1D OGFOD3 LOC101929511 MIR4525 FN3KRP SECTM1 TBCD WDR45B
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	MIR6787 DUS1L MAFG-AS1 ALYREF NARF PCYT2 UTS2R ANAPC11 PPP1R27 GPS1 CCDC57 HEXDC PYCR1 OGFOD3 DCXR LOC105371944 P4HB LOC105376790 B3GNTL1 SNORD134 RAC3 FOXK2 SLC16A3 ARHGDIA MIR4525 TBCD FASN LOC105376791 LRRC45 NPB ASPSCR1 NOTUM CD7 CSNK1D MYADML2 LOC101929511 SIRT7 RFNG MCRIP1 LOC101929552 MAFG TEX19 ZNF750 METRNL C17orf62 RAB40B FN3K FN3KRP SECTM1 STRA13 WDR45B

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

small GTPase mediated signal transduction
protein ubiquitination
symbiont intracellular protein transport in host

Function(s)

GTP binding