Hs00598291_cn

• Gene Symbol: NUBP1
• Assay Reference Genome Location: Chr.16:10769032 on build GRCh38
• Cytoband: 16p13.13

Target Gene Details

• Entrez Gene ID: 4682
• Gene Name: nucleotide binding protein 1
• Gene Aliases: NBP, NBP1, NBP35
• Location: Chr.16:10743164-10769351 on Build GRCh38
• Assay Gene Location: Overlaps Intron 10 - Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NUBP1	NM_001278506.1			NP_001265435.1
	NM_001323594.1			NP_001310523.1
	NM_001323595.1			NP_001310524.1
	NM_001323596.1			NP_001310525.1
	NM_001323597.1			NP_001310526.1
	NM_002484.3			NP_002475.2
	XM_017023252.1			XP_016878741.1
	AK223204.1			BAD96924.1
	BC100290.1			AAI00291.1
	BC109322.1			AAI09323.1
	BC109323.1			AAI09324.1
	U01833.1			AAA61932.1

Target Gene Details

• Entrez Gene ID: 780776
• Gene Name: trans-golgi network vesicle protein 23 homolog A
• Gene Aliases: FAM18A, YDR084C
• Location: Chr.16:10758034-10818902 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TVP23A	NM_001079512.3	8	1013	NP_001072980.1
	NM_001318873.1	8	1464	NP_001305802.1
	NR_134901.1
	NR_134902.1
	NR_134903.1
	NR_134904.1
	NR_134905.1
	NR_134906.1
	XM_006720944.3			XP_006721007.1
	XM_011522654.2	8	1936	XP_011520956.1
	XM_017023649.1	8	1498	XP_016879138.1
	XM_017023650.1	8	1698	XP_016879139.1
	XM_017023651.1	8	1126	XP_016879140.1
	AK124106.1	8	1321
	AK294418.1	8	1004
	AL833564.1	6	901
	BC146882.1
	BC146886.1
	BC171817.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833140	Chr.16:10664013 - 10791497 on Build GRCh38	Loss	TVP23A TEKT5 NUBP1
nsv1040428	Chr.16:10145408 - 11362136 on Build GRCh38	Gain	TVP23A SOCS1 LOC105371083 CLEC16A TNP2 MIR548H2 ATF7IP2 TEKT5 GRIN2A LOC107984859 PRM1 DEXI NUBP1 PRM2 RMI2 PRM3 CIITA EMP2

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cellular iron ion homeostasis
negative regulation of centrosome duplication
cell growth
iron-sulfur cluster assembly
cell projection organization
centrosome localization
protein localization to cell cortex
protein secretion
vesicle-mediated transport

Function(s)

nucleotide binding
protein binding
ATP binding
metal ion binding
iron-sulfur cluster binding
4 iron, 4 sulfur cluster binding