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See other CLCN7 CNV Assays ›
Gene Symbol
CLCN7
Assay Reference Genome
Location

Chr.16:1446662 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00599640_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1186

Gene Name:

 chloride voltage-gated channel 7

Gene Aliases:

 CLC-7, CLC7, OPTA2, OPTB4, PPP1R63

Location:

 Chr.16:1444933-1475084 on Build GRCh38

Assay Gene Location:

 Within Exon 26
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CLCN7 NM_001114331.2 24 2425 NP_001107803.1
NM_001287.5 25 2497 NP_001278.1
XM_011522354.1 25 2579 XP_011520656.1
AF224741.1 25 2425 AAF34711.1
AK056551.1 24 2366
AK096963.1 7 1422
AK122944.1 25 3013
AK128285.1 9 2411
AK130196.1 3 329
AK291404.1 25 2440
AK292136.1 24 2347
AK304796.1 25 2290
AK315978.1 26 2320
BC004946.1 8 757 AAH04946.1
BC006158.1 14 1332 AAH06158.1
BC012737.2 25 2424 AAH12737.1
BC109196.1 6 585 AAI09197.1
U88844.1 3 160 AAB48530.1
Z67743.1 25 2339 CAA91556.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571161 Chr.16:1431019 - 1457987 on Build GRCh38 Gain CLCN7 CCDC154 LOC105371045
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain C16orf91 CLCN7 CCDC154 UNKL LOC105371045 TSR3 GNPTG IFT140 UBE2I PTX4 TELO2 BAIAP3
nsv471068 Chr.16:1439259 - 1460566 on Build GRCh38 Gain CLCN7 CCDC154
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication FLJ42627 CACNA1H NTN3 MIR3178 ABCA3 MIR1225 ARHGDIG PRSS27 NUBP2 MLST8 UBE2I LOC100134368 ABCA17P HBM DNASE1L2 LUC7L MIR3177 TMEM8A MIR6768 SNORA64 POLR3K TSC2 LOC101929280 CCDC154 DECR2 SSTR5 RPL23AP5 MIR5587 PDIA2 RAB26 MIR662 SOX8 TMEM204 GNG13 LOC100287175 PRSS29P CCNF LOC107987233 LOC105371046 MIR3677 CEMP1 NDUFB10 LOC105371038 MIR4717 KCTD5 FAM234A IFT140 HAGHL AXIN1 TBL3 CASKIN1 NME4 HS3ST6 LOC729652 NOXO1 PKD1 HBZ HBQ1 NPW TPSG1 RNF151 SYNGR3 EME2 PRR25 RHBDF1 LOC652276 DDX11L10 PGP LINC00254 MEIOB LOC105371047 SNHG9 SNHG19 MIR940 RAB40C TSR3 CHTF18 NPRL3 PDPK1 NTHL1 FAHD1 E4F1 MSRB1 ATP6V0C MIR3176 C16orf59 LOC105371045 WASIR2 SSTR5-AS1 RNPS1 HN1L LMF1 RPUSD1 LOC105371049 MIR3180-5 SNRNP25 SPSB3 BRICD5 CRAMP1 SLC9A3R2 UNKL ZNF598 JMJD8 TPSD1 PIGQ METRN RHOT2 TBC1D24 PTX4 MPG NME3 STUB1 LINC00235 MSLN TPSAB1 ERVK13-1 SNORA78 CAPN15 WDR90 LOC106660606 ECI1 LOC105371184 MCRIP2 TELO2 BAIAP3 LMF1-AS1 RAB11FIP3 HAGH TRAF7 HBA2 HBA1 PRR35 METTL26 NHLRC4 AMDHD2 MIR6767 C1QTNF8 SNORA10 NARFL MAPK8IP3 C16orf91 CLCN7 WFIKKN1 MRPS34 SNORD60 CCDC78 RGS11 MIR6511B1 FBXL16 TPSB2 RPL3L RHBDL1 MIR6859-4 FAM173A RPS2 GFER MRPL28 GNPTG LOC107984876 MIR4516 WDR24 IGFALS
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss CACNA1H LMF1-AS1 C16orf91 SOX8 CLCN7 PRSS29P UNKL TSR3 TPSB2 TPSD1 UBE2I TPSG1 TPSAB1 C1QTNF8 CCDC154 LOC105371045 GNPTG LOC107984876 SSTR5 SSTR5-AS1 LMF1 BAIAP3
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion CACNA1H C16orf91 CLCN7 TMEM204 PRSS29P LOC105371047 UNKL TSR3 TPSB2 TPSD1 UBE2I TPSG1 TPSAB1 CCDC154 LOC105371045 GNPTG IFT140 PTX4 TELO2 BAIAP3
nsv817713 Chr.16:1426464 - 1460566 on Build GRCh38 Loss CLCN7 CCDC154 LOC105371045
nsv819844 Chr.16:1401518 - 1457987 on Build GRCh38 Gain C16orf91 CLCN7 CCDC154 UNKL LOC105371045

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