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See other TRPV1 CNV Assays ›
Gene Symbol
TRPV1
Assay Reference Genome
Location

Chr.17:3566786 on build GRCh38
Cytoband
17p13.2
Assay ID Hs00614839_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7442

Gene Name:

 transient receptor potential cation channel subfamily V member 1

Gene Aliases:

 VR1

Location:

 Chr.17:3565446-3609411 on Build GRCh38

Assay Gene Location:

 Within Exon 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRPV1 NM_018727.5 16 2707 NP_061197.4
NM_080704.3 17 2824 NP_542435.2
NM_080705.3 16 2750 NP_542436.2
NM_080706.3 15 3076 NP_542437.2
AF196175.1 16 2762 AAG43466.1
AF196176.1 16 2748 AAG43467.1
AJ272063.2 16 2707 CAB89866.2
AJ277028.1 15 3076 CAB95729.1
AL136801.1 17 2820 CAB66735.1
AY131289.1 AAM89472.1
AY986821.1 AAX84657.1
BC132820.1 15 3028
BC136633.1 15 3028
DQ177332.1 ABA06605.1
DQ177333.1 ABA06606.1
DQ898279.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss TRPV1 OR3A3 ASPA TRPV3 OR1A2 OR1A1 OR3A4P OR1D4 OR3A2 OR3A1 OR1E2 OR1E1 SPATA22
esv3892951 Chr.17:3566559 - 3597215 on Build GRCh38 Gain TRPV1
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain TRPV1 CAMKK1 OR3A3 ASPA TRPV3 ITGAE NCBP3 P2RX5-TAX1BP3 OR3A2 OR1E2 SHPK OR1E1 CTNS TAX1BP3 SPATA22 GSG2 EMC6 P2RX5
esv3572354 Chr.17:3528675 - 3654158 on Build GRCh38 Gain TRPV1 SHPK CTNS TRPV3
dgv556e214 Chr.17:3560499 - 3573090 on Build GRCh38 Loss TRPV1
nsv516676 Chr.17:3553441 - 3652130 on Build GRCh38 Gain+Loss TRPV1 SHPK CTNS TRPV3
nsv574237 Chr.17:3486822 - 3729542 on Build GRCh38 Loss TRPV1 ITGAE P2RX5-TAX1BP3 SHPK ASPA CTNS TRPV3 TAX1BP3 SPATA22 GSG2 EMC6 P2RX5
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain LOC105371592 PAFAH1B1 OR3A3 ASPA OR1A2 RAP1GAP2 OR1D4 ITGAE MIR6776 OR3A1 OR1E2 OR1D2 SHPK OR1G1 CTNS P2RX1 SPATA22 GSG2 LOC105371591 CCDC92B TRPV1 LOC101927911 CAMKK1 OR1D5 CLUH TRPV3 MIR1253 OR1A1 OR3A4P NCBP3 P2RX5-TAX1BP3 OR3A2 OR1E1 ATP2A3 TAX1BP3 EMC6 P2RX5
esv2662311 Chr.17:3561202 - 3568311 on Build GRCh38 Deletion TRPV1
nsv526175 Chr.17:3528392 - 3616421 on Build GRCh38 Gain TRPV1 SHPK TRPV3
esv3639746 Chr.17:3561030 - 3568136 on Build GRCh38 Loss TRPV1
esv3639748 Chr.17:3562752 - 3573090 on Build GRCh38 Gain TRPV1
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss TRPV1 OR3A3 OR1E2 SHPK ASPA TRPV3 SPATA22

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