Hs00619367_cn

• Gene Symbol: SLC51A
• Assay Reference Genome Location: Chr.3:196226984 on build GRCh38
• Cytoband: 3q29

Target Gene Details

• Entrez Gene ID: 200931
• Gene Name: solute carrier family 51 alpha subunit
• Gene Aliases: OSTA, OSTalpha
• Location: Chr.3:196216512-196233430 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC51A	NM_152672.5			NP_689885.4
	AK172837.1			BAD18802.1
	AK300996.1
	AY194243.1			AAP23993.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv521280	Chr.3:196222670 - 196228601 on Build GRCh38	Loss	SLC51A
nsv997797	Chr.3:195931489 - 196486087 on Build GRCh38	Gain	SDHAP1 TM4SF19-TCTEX1D2 TM4SF19-AS1 ZDHHC19 TFRC PCYT1A UBXN7 TM4SF19 UBXN7-AS1 TCTEX1D2 LOC105374301 SLC51A RNF168 LINC00885
esv3569221	Chr.3:196209781 - 196229993 on Build GRCh38	Loss	ZDHHC19 SLC51A
nsv1009811	Chr.3:196124925 - 196411200 on Build GRCh38	Gain	TCTEX1D2 TM4SF19-TCTEX1D2 TM4SF19-AS1 ZDHHC19 SLC51A PCYT1A UBXN7 TM4SF19 LINC00885
nsv593071	Chr.3:196132016 - 196345571 on Build GRCh38	Gain	TCTEX1D2 TM4SF19-TCTEX1D2 TM4SF19-AS1 ZDHHC19 SLC51A PCYT1A TM4SF19 LINC00885
nsv1008512	Chr.3:195982791 - 196248065 on Build GRCh38	Gain	SDHAP1 ZDHHC19 TFRC LOC105374301 SLC51A PCYT1A LINC00885
esv2759213	Chr.3:195382058 - 196344722 on Build GRCh38	Gain+Loss	MIR6829 LOC105374299 SDHAP1 APOD SDHAP2 TM4SF19-TCTEX1D2 TM4SF19-AS1 ZDHHC19 TFRC PPP1R2 PCYT1A TM4SF19 MUC4 LINC00969 TCTEX1D2 TNK2 LOC105374301 MUC20 MIR570 LOC105374297 ACAP2 SLC51A LOC101929697 LINC00885

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Process(es)

transport
bile acid and bile salt transport

Function(s)

transporter activity
protein homodimerization activity
protein heterodimerization activity