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See other SPATC1 CNV Assays ›
Gene Symbol
SPATC1
Assay Reference Genome
Location

Chr.8:144012694 on build GRCh38
Cytoband
8q24.3
Assay ID Hs00621074_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 375686

Gene Name:

 spermatogenesis and centriole associated 1

Gene Aliases:

 SPATA15

Location:

 Chr.8:144010992-144047114 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 2 - Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATC1 NM_001134374.1 NP_001127846.1
NM_198572.2 NP_940974.2
XM_011517021.1 XP_011515323.1
XM_011517022.2 XP_011515324.1
XM_017013399.1 XP_016868888.1
AB092352.1 BAD08232.1
AK301710.1
BC050390.1 AAH50390.1
BC053547.1 AAH53547.1
DB052198.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss SPATC1 HGH1 GPAA1 MROH1 WDR97 MIR6847 EXOSC4 CYC1 MAF1 SHARPIN SMPD5 MIR6846 OPLAH
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss SPATC1 HGH1 SLC52A2 GRINA MIR6848 WDR97 MIR939 TONSL-AS1 EXOSC4 DGAT1 CYC1 MIR1234 MAF1 LOC101928953 PPP1R16A HSF1 VPS28 MFSD3 CPSF1 PLEC MIR6846 OPLAH ADCK5 CYHR1 MIR6849 MIR7112 PARP10 LOC101928902 FBXL6 RECQL4 GPAA1 MROH1 LRRC14 SLC39A4 SCX MIR6847 MIR661 FOXH1 TMEM249 TONSL KIFC2 MIR6893 SHARPIN GPT SMPD5 BOP1 SCRT1
nsv6446 Chr.8:144012529 - 144050050 on Build GRCh38 Insertion SPATC1 SMPD5
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss SPATC1 HGH1 SLC52A2 GRINA MIR6848 WDR97 MIR939 TONSL-AS1 EXOSC4 DGAT1 CYC1 MIR1234 MAF1 LOC101928953 PPP1R16A HSF1 VPS28 MFSD3 CPSF1 PLEC MIR6846 OPLAH ADCK5 CYHR1 MIR6849 MIR7112 PARP10 LOC101928902 FBXL6 RECQL4 GPAA1 MROH1 LRRC14 SLC39A4 SCX MIR6847 MIR661 FOXH1 TMEM249 TONSL KIFC2 MIR6893 SHARPIN GPT SMPD5 BOP1 SCRT1
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss SPATC1 GPAA1 GRINA WDR97 MIR6847 EXOSC4 CYC1 MAF1 SHARPIN SMPD5 PLEC MIR6846 OPLAH PARP10
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss SPATC1 HGH1 GPAA1 MROH1 GRINA WDR97 MIR6847 MIR661 EXOSC4 CYC1 MAF1 EPPK1 SHARPIN SMPD5 PLEC MIR6846 OPLAH PARP10
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion SPATC1 GPAA1 GRINA WDR97 MIR6847 MIR661 EXOSC4 CYC1 MAF1 EPPK1 SHARPIN SMPD5 PLEC MIR6846 OPLAH PARP10
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion LOC642574 SPATC1 NRBP2 PUF60 GRINA MIR6847 MIR661 MIR937 EXOSC4 MIR6845 SCRIB EPPK1 SMPD5 PLEC MIR6846 OPLAH PARP10
esv21567 Chr.8:144004337 - 144012898 on Build GRCh38 Gain SPATC1
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain SPATC1 SMPD5 GPAA1 PLEC MIR6846 OPLAH GRINA MIR6847 MIR661 EXOSC4 PARP10 CYC1
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain SPATC1 GPAA1 GRINA WDR97 MIR6847 MIR661 EXOSC4 CYC1 MAF1 SHARPIN SMPD5 PLEC MIR6846 OPLAH PARP10
nsv612906 Chr.8:143917935 - 144090784 on Build GRCh38 Loss SPATC1 SMPD5 GPAA1 PLEC MIR6846 OPLAH GRINA MIR6847 MIR661 EXOSC4 PARP10

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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