Hs00626563_cn

• Gene Symbol: DDX28
• Assay Reference Genome Location: Chr.16:68022437 on build GRCh38
• Cytoband: 16q22.1

Target Gene Details

• Entrez Gene ID: 55794
• Gene Name: DEAD-box helicase 28
• Gene Aliases: MDDX28
• Location: Chr.16:68021274-68023867 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
DDX28	NM_018380.3	1	1431	NP_060850.2
	AK002144.1	1	1006	BAA92106.1
	BC024273.1	1	773	AAH24273.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2666619	Chr.16:68003989 - 68045407 on Build GRCh38	Deletion	DUS2 DDX28 LOC100131303
nsv522852	Chr.16:67153308 - 68071571 on Build GRCh38	Gain	AGRP EXOC3L1 PSKH1 ELMO3 SLC12A4 CTRL KIAA0895L LOC100131303 ENKD1 TMEM208 THAP11 NOL3 DUS2 LRRC29 TPPP3 LOC107984813 DPEP3 GFOD2 C16orf86 PLEKHG4 NUTF2 LRRC36 MIR328 PARD6A ATP6V0D1 DPEP2 PSMB10 CARMIL2 ACD DDX28 ZDHHC1 HSD11B2 LOC105369155 LCAT FHOD1 EDC4 TRADD NRN1L FBXL8 HSF4 FAM65A LOC100505942 E2F4 SLC9A5 TSNAXIP1 KCTD19 CENPT RANBP10 CTCF
esv3638897	Chr.16:68004075 - 68045657 on Build GRCh38	Loss	DUS2 DDX28 LOC100131303
esv3638899	Chr.16:68008886 - 68035332 on Build GRCh38	Loss	DUS2 DDX28 LOC100131303
nsv524363	Chr.16:67136529 - 68071571 on Build GRCh38	Loss	AGRP EXOC3L1 PSKH1 ELMO3 SLC12A4 CTRL KIAA0895L LOC100131303 ENKD1 TMEM208 THAP11 NOL3 DUS2 LRRC29 TPPP3 LOC107984813 DPEP3 C16orf70 GFOD2 C16orf86 PLEKHG4 NUTF2 LRRC36 MIR328 PARD6A ATP6V0D1 DPEP2 PSMB10 CARMIL2 ACD DDX28 ZDHHC1 HSD11B2 LOC105369155 LCAT FHOD1 EDC4 TRADD NRN1L FBXL8 HSF4 FAM65A B3GNT9 LOC100505942 E2F4 SLC9A5 TSNAXIP1 KCTD19 CENPT RANBP10 CTCF

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

RNA secondary structure unwinding
mitochondrial large ribosomal subunit assembly

Function(s)

ATP-dependent RNA helicase activity
ATP binding
rRNA binding
poly(A) RNA binding