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See other ST6GAL1 CNV Assays ›
Gene Symbol
ST6GAL1
Assay Reference Genome
Location

Chr.3:186963833 on build GRCh38
Cytoband
3q27.3
Assay ID Hs00627438_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6480

Gene Name:

 ST6 beta-galactoside alpha-2,6-sialyltransferase 1

Gene Aliases:

 SIAT1, ST6GalI, ST6N

Location:

 Chr.3:186930343-187078553 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ST6GAL1 NM_173216.2 2 358 NP_775323.1
NM_173217.2 2 358 NP_775324.1
XM_006713734.1 3 613 XP_006713797.1
XM_011513085.1 3 621 XP_011511387.1
XM_017007065.1 4 705 XP_016862554.1
A17362.1 2 163 CAA01327.1
DB152155.1 2 399
DB235666.1 2 147
X17247.1 2 157 CAA35111.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1001111 Chr.3:186796249 - 187014891 on Build GRCh38 Gain RFC4 LOC102724699 ADIPOQ-AS1 ADIPOQ ST6GAL1
esv34136 Chr.3:186697095 - 187036942 on Build GRCh38 Loss SNORA81 RFC4 SNORA63 KNG1 LOC102724699 SNORA4 EIF4A2 MIR1248 ADIPOQ-AS1 SNORD2 ADIPOQ ST6GAL1
nsv1003732 Chr.3:186888059 - 186967511 on Build GRCh38 Gain ST6GAL1
nsv508975 Chr.3:186936621 - 186986854 on Build GRCh38 Insertion ST6GAL1
nsv1004008 Chr.3:186879814 - 187204053 on Build GRCh38 Gain RTP1 RPL39L LOC101929106 ST6GAL1
esv2759207 Chr.3:186891945 - 187066496 on Build GRCh38 Loss ST6GAL1

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More Information


Additional Information:

For this assay, SNP(s) [rs71634020] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Function(s) Process(es)


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