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See other SPATA2L CNV Assays ›
Gene Symbol
SPATA2L
Assay Reference Genome
Location

Chr.16:89697498 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00633404_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 124044

Gene Name:

 spermatogenesis associated 2 like

Gene Aliases:

 C16orf76, tamo

Location:

 Chr.16:89696357-89701993 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA2L NM_152339.3 3 1198 NP_689552.2
XM_005256279.4 3 1615 XP_005256336.1
AF070574.1 1 429
AK127372.1 2 1002
BC027606.1 AAH27606.1
BC039608.1 3 1176 AAH39608.1
BC053588.1 3 1180 AAH53588.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion ZNF276 VPS9D1-AS1 FANCA SPATA2L CDK10 VPS9D1
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain LOC105371419 ZNF276 VPS9D1-AS1 FANCA SPATA2L SPATA33 LOC107984817 CDK10 SPIRE2 VPS9D1
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss ZNF276 AFG3L1P VPS9D1-AS1 GAS8-AS1 SPATA2L TUBB3 DPEP1 SPIRE2 VPS9D1 LOC105371419 DBNDD1 CHMP1A MC1R TCF25 CENPBD1 FANCA SPATA33 LOC107984817 DEF8 CDK10 GAS8
nsv516241 Chr.16:89696002 - 89723490 on Build GRCh38 Loss ZNF276 VPS9D1-AS1 SPATA2L CDK10 VPS9D1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ZNF276 SPG7 LOC100287036 TUBB8P7 GAS8-AS1 LOC101927817 ANKRD11 DPEP1 LOC105371414 SPIRE2 DBNDD1 MC1R TCF25 CENPBD1 CPNE7 FANCA GAS8 PRDM7 AFG3L1P ZNF778 VPS9D1-AS1 SPATA2L TUBB3 VPS9D1 LOC105371419 CHMP1A FAM157C URAHP SPATA33 LOC107984817 SNORD68 DEF8 CDK10 RPL13
nsv833330 Chr.16:89678466 - 89741783 on Build GRCh38 Loss ZNF276 VPS9D1-AS1 FANCA SPATA2L CDK10 VPS9D1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss ZNF276 SPG7 LOC100287036 TUBB8P7 GAS8-AS1 LOC101927817 LOC107987238 PIEZO1 CBFA2T3 MVD TCF25 CENPBD1 FANCA GAS8 AFG3L1P ZNF778 RNF166 CDH15 TUBB3 LOC105371419 FAM157C URAHP SPATA33 LOC100129697 LOC400558 CYBA SNORD68 CDK10 LOC100289580 SLC22A31 SNAI3-AS1 APRT ANKRD11 CTU2 DPEP1 LOC105371414 SPIRE2 DBNDD1 GALNS LOC101927793 MC1R CPNE7 SNAI3 LOC105371409 MIR4722 LOC339059 LINC00304 PRDM7 VPS9D1-AS1 IL17C SPATA2L ACSF3 CDT1 PABPN1L VPS9D1 CHMP1A TRAPPC2L LOC107984817 DEF8 RPL13
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion ZNF276 SPG7 VPS9D1-AS1 SPATA2L DPEP1 VPS9D1 CHMP1A CPNE7 FANCA SPATA33 SNORD68 CDK10 RPL13

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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