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Gene Symbol
ATXN2L
Assay Reference Genome
Location

Chr.16:28836690 on build GRCh38
Cytoband
16p11.2
Assay ID Hs00634598_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 11273

Gene Name:

 ataxin 2 like

Gene Aliases:

 A2D, A2LG, A2LP, A2RP

Location:

 Chr.16:28823048-28837237 on Build GRCh38

Assay Gene Location:

 Within Exon 23
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATXN2L NM_001308230.1 NP_001295159.1
NM_007245.3 22 3865 NP_009176.2
NM_017492.3 NP_059867.3
NM_145714.2 NP_663760.1
NM_148414.2 NP_680780.1
NM_148415.2 NP_680781.1
NM_148416.2 NP_680782.1
XM_005255061.1 23 3737 XP_005255118.1
XM_005255062.1 XP_005255119.1
XM_005255063.3 XP_005255120.1
XM_005255064.1 23 3734 XP_005255121.1
XM_005255065.1 23 3719 XP_005255122.1
XM_005255066.1 23 3716 XP_005255123.1
XM_005255067.1 23 3683 XP_005255124.1
XM_005255068.1 XP_005255125.1
XM_005255069.1 22 3886 XP_005255126.1
XM_005255070.1 XP_005255127.1
XM_005255071.1 XP_005255128.1
XM_005255074.1 XP_005255131.1
XM_005255075.1 XP_005255132.1
XM_005255076.1 XP_005255133.1
XM_005255077.1 23 3620 XP_005255134.1
XM_006721007.1 22 3665 XP_006721070.1
XM_006721008.1 22 3647 XP_006721071.1
XM_006721009.1 23 3614 XP_006721072.1
XM_006721010.2 XP_006721073.1
XM_006721011.1 23 3560 XP_006721074.1
XM_006721012.3 XP_006721075.1
XM_011545719.2 XP_011544021.1
XM_011545721.2 XP_011544023.1
XM_011545722.1 23 3437 XP_011544024.1
XM_017022891.1 23 3602 XP_016878380.1
XM_017022892.1 23 3419 XP_016878381.1
AF034373.1 23 4113 AAC69607.1
AF070605.1
AJ317970.1 22 3821 CAC38068.1
AJ317971.2 CAC38069.3
AJ317972.2 CAC38070.3
AJ317973.2 CAC38071.3
AJ317974.2 CAC38072.3
AK289981.1
AL137587.1
AY188334.1 AAO12056.1
AY188335.1 AAO12057.1
AY188336.1 AAO12058.1
AY188337.1 AAO12059.1
AY188338.1 23 4021 AAO12060.1
BC010239.2 7 1631 AAH10239.1
BC068012.1 23 3723 AAH68012.1
BC082760.1 AAH82760.1
BC136584.1
U70671.1 AAB19201.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4987n54 Chr.16:28824884 - 29032129 on Build GRCh38 Gain RABEP2 ATP2A1-AS1 SPNS1 MIR4517 TUFM CD19 MIR4721 LAT NFATC2IP SH2B1 ATP2A1 ATXN2L
esv3892826 Chr.16:28814728 - 29032129 on Build GRCh38 Gain+Loss RABEP2 ATP2A1-AS1 SPNS1 MIR4517 TUFM CD19 MIR4721 LAT NFATC2IP SH2B1 ATP2A1 ATXN2L
esv3638345 Chr.16:28824146 - 28839056 on Build GRCh38 Gain ATXN2L
esv2758640 Chr.16:28163817 - 29139232 on Build GRCh38 Gain+Loss ATP2A1-AS1 NFATC2IP SULT1A2 CLN3 NPIP MIR6862-2 MIR4517 TUFM SBK1 IL27 LAT RRN3P2 EIF3CL ATP2A1 LOC101928215 NPIPB8 XPO6 ATXN2L SGF29 SPNS1 APOBR NPIPB6 EIF3C NPIPB9 RABEP2 CD19 MIR4721 NUPR1 MIR6862-1 SH2B1 SULT1A1
nsv518648 Chr.16:28826194 - 29032129 on Build GRCh38 Loss RABEP2 ATP2A1-AS1 SPNS1 MIR4517 TUFM CD19 MIR4721 LAT NFATC2IP SH2B1 ATP2A1 ATXN2L
nsv1059555 Chr.16:28373144 - 29195838 on Build GRCh38 Gain ATP2A1-AS1 NFATC2IP SULT1A2 CLN3 NPIP MIR6862-2 MIR4517 TUFM IL27 LAT RRN3P2 EIF3CL ATP2A1 LOC101928215 NPIPB8 ATXN2L SGF29 SPNS1 APOBR EIF3C LOC107984832 NPIPB9 RABEP2 CD19 MIR4721 NUPR1 MIR6862-1 SH2B1 SULT1A1
dgv2831n100 Chr.16:28812594 - 29032542 on Build GRCh38 Gain RABEP2 ATP2A1-AS1 SPNS1 MIR4517 TUFM CD19 MIR4721 LAT NFATC2IP SH2B1 ATP2A1 ATXN2L
esv3570454 Chr.16:28799004 - 29032129 on Build GRCh38 Gain RABEP2 ATP2A1-AS1 SPNS1 MIR4517 TUFM CD19 MIR4721 LAT NFATC2IP SH2B1 ATP2A1 ATXN2L
nsv571805 Chr.16:28824174 - 29032129 on Build GRCh38 Loss RABEP2 ATP2A1-AS1 SPNS1 MIR4517 TUFM CD19 MIR4721 LAT NFATC2IP SH2B1 ATP2A1 ATXN2L
nsv1064483 Chr.16:28620264 - 28857362 on Build GRCh38 Loss TUFM MIR4721 EIF3C SH2B1 SULT1A1 NPIPB9 NPIPB8 ATXN2L MIR6862-2

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