Hs00647826_cn

• Gene Symbol: FAM175A
• Assay Reference Genome Location: Chr.4:83484999 on build GRCh38
• Cytoband: 4q21.23

Target Gene Details

• Entrez Gene ID: 84142
• Gene Name: family with sequence similarity 175 member A
• Gene Aliases: ABRA1, CCDC98
• Location: Chr.4:83459515-83485181 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM175A	NM_139076.2			NP_620775.2
	XM_005263280.4			XP_005263337.1
	XM_017008694.1			XP_016864183.1
	AK022704.1			BAB14189.1
	AK023676.1			BAB14635.1
	AY358576.1			AAQ88939.1
	BC016905.1			AAH16905.1
	BC039573.1			AAH39573.1
	DA765424.1
	EF531340.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3893971	Chr.4:83096792 - 83493129 on Build GRCh38	Gain	PLAC8 HPSE MRPS18C HELQ FAM175A COQ2
nsv829994	Chr.4:83445146 - 83637163 on Build GRCh38	Loss	MRPS18C GPAT3 HELQ FAM175A

More Information

Additional Information:

For this assay, SNP(s) [rs139863124] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

double-strand break repair
double-strand break repair via nonhomologous end joining
response to ionizing radiation
covalent chromatin modification
G2 DNA damage checkpoint
positive regulation of DNA repair

Function(s)

protein binding
polyubiquitin binding