Hs00670648_cn

• Gene Symbol: HNRNPA1
• Assay Reference Genome Location: Chr.12:54280716 on build GRCh38
• Cytoband: 12q13.13

Target Gene Details

• Entrez Gene ID: 3178
• Gene Name: heterogeneous nuclear ribonucleoprotein A1
• Gene Aliases: ALS19, ALS20, HNRPA1, HNRPA1L3, IBMPFD3, UP 1, hnRNP A1, hnRNP-A1
• Location: Chr.12:54280690-54287088 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HNRNPA1	NM_002136.3			NP_002127.1
	NM_031157.3			NP_112420.1
	NR_135167.1
	XM_005268826.1			XP_005268883.1
	XM_017019251.1			XP_016874740.1
	AK129814.1
	AK291113.1
	AK298176.1
	AK303303.1
	AK308679.1
	BC009600.1			AAH09600.1
	BC070315.1			AAH70315.1
	CD705336.1
	DC358304.1	1	122
	X06747.1			CAA29922.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv25123	Chr.12:54279681 - 54280827 on Build GRCh38	Loss	HNRNPA1 CBX5
nsv1049160	Chr.12:54254119 - 54362754 on Build GRCh38	Gain	MIR148B LOC102724050 GPR84 HNRNPA1 COPZ1 NFE2 CBX5
nsv832420	Chr.12:54137272 - 54296797 on Build GRCh38	Loss	MIR3198-2 HNRNPA1 SMUG1 NFE2 CBX5

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

mRNA splicing, via spliceosome
mRNA processing
RNA export from nucleus
fibroblast growth factor receptor signaling pathway
gene expression
viral process
negative regulation of telomere maintenance via telomerase
positive regulation of telomere maintenance via telomerase
mRNA transport
nuclear export
nuclear import

Function(s)

nucleotide binding
single-stranded DNA binding
RNA binding
single-stranded RNA binding
protein binding
poly(A) RNA binding
telomeric repeat-containing RNA binding
G-rich strand telomeric DNA binding