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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49697400 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00681981_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 8 - Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AF357970.1 AAL99615.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
BC029104.1 AAH29104.1
BP194020.1
DB456457.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss ADM5 RRAS PRRG2 PRR12 NOSIP PRMT1 BCL2L12 MIR5088 CPT1C SCAF1 IRF3
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss ADM5 RRAS PRRG2 PRR12 NOSIP PRMT1 BCL2L12 MIR5088 CPT1C SCAF1 IRF3
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss ALDH16A1 GRIN2D LOC100287477 PRRG2 MIR150 SNAR-A7 C19orf73 CARD8 TEAD2 SNAR-A11 SNORD34 SNAR-C3 PTOV1-AS1 SNORD35B MIR4749 RASIP1 SLC17A7 CABP5 MIR6798 MIR6799 CGB2 FUZ EMP3 LMTK3 MIR4751 ELSPBP1 SNRNP70 SYNGR4 PPP1R15A RCN3 LOC105447645 FCGRT LOC101059948 NUP62 TULP2 SNAR-A9 SNAR-A13 PNKP CYTH2 CCDC114 HSD17B14 NOSIP GFY SNAR-C1 CCDC155 KCNJ14 FGF21 AKT1S1 TBC1D17 FLJ26850 BSPH1 PLEKHA4 DBP RRAS PRR12 PRMT1 NTN5 CPT1C LIG1 CARD8-AS1 SNAR-D ADM5 VRK3 SNORD35A SNORD32A FUT1 RUVBL2 MED25 GRWD1 KDELR1 SNAR-B2 MIR6800 SEC1P SIGLEC11 SPHK2 LOC101928295 PTH2 LOC105372430 SNAR-A5 BCL2L12 CGB8 PIH1D1 SCAF1 SNAR-A3 SNAR-C5 NUCB1 SNAR-G2 CA11 SNAR-G1 MAMSTR MIR5088 SNAR-A1 ZNF473 BAX MIR4750 FLT3LG IZUMO1 PPFIA3 SULT2B1 CD37 CGB3 SPACA4 IL4I1 LHB TSKS SNAR-A2 SIGLEC16 C19orf68 DHDH SNAR-A8 CGB7 SNAR-A6 LIN7B CGB5 RPL18 DKKL1 FTL TMEM143 FUT2 KCNA7 CGB1 SNORD33 TRPM4 AP2A1 PTOV1-AS2 SNAR-A12 SNAR-A14 HRC ZNF114 PLA2G4C-AS1 SNAR-A10 NUCB1-AS1 MIR4324 SNAR-A4 PTOV1 PLA2G4C FAM83E GYS1 SNAR-C2 RPS11 SNAR-C4 NTF4 SLC6A16 RPL13A ATF5 SNAR-B1 BCAT2 IRF3
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain ADM5 RRAS PRR12 PRMT1 BCL2L12 MIR5088 CPT1C SCAF1 IRF3
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion PRRG2 NOSIP BCL2L12 AKT1S1 TBC1D17 SCAF1 PTOV1-AS1 MIR4749 AP2A1 RRAS PTOV1-AS2 MIR6799 PRR12 PRMT1 MIR5088 CPT1C FUZ MIR4750 MIR4751 ADM5 IL4I1 PTOV1 MED25 TSKS NUP62 MIR6800 PNKP ATF5 IRF3
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain ADM5 RRAS PRRG2 PRR12 NOSIP PRMT1 BCL2L12 MIR5088 CPT1C SCAF1 IRF3
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion PRRG2 MIR150 NOSIP BCL2L12 SNORD34 SCAF1 PTOV1-AS1 SNORD35B SNORD33 AP2A1 RRAS MIR6799 PRR12 PRMT1 MIR5088 CPT1C FUZ ADM5 SNORD35A SNORD32A RCN3 FCGRT MED25 RPS11 TSKS MIR6800 RPL13A IRF3

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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