accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other HLA-DPA1 CNV Assays ›
Gene Symbol
HLA-DPA1
Assay Reference Genome
Location

Chr.6:33073516 on build GRCh38
Cytoband
6p21.32
Assay ID Hs00682392_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 3113

Gene Name:

 major histocompatibility complex, class II, DP alpha 1

Gene Aliases:

 DP(W3), DP(W4), HLA-DP1A, HLADP, HLASB, PLT1

Location:

 Chr.6:33064569-33080778 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HLA-DPA1 NM_001242524.1 2 253 NP_001229453.1
NM_001242525.1 2 177 NP_001229454.1
NM_033554.3 1 162 NP_291032.2
AB209058.1 1 67 BAD92295.1
AK292709.1 1 69
BC009956.2 1 86 AAH09956.1
BI553587.1 2 182
BP338039.1 1 162
CD516536.1 2 185
M27487.1 1 90 AAA63220.1
X00457.1 CAA25143.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv823645 Chr.6:33061191 - 33091364 on Build GRCh38 Loss HLA-DPB1 HLA-DPA1
esv2731879 Chr.6:33065144 - 33107309 on Build GRCh38 Deletion HLA-DPB1 HLA-DPA1
nsv1024429 Chr.6:32997190 - 33154554 on Build GRCh38 Loss HLA-DPB1 HLA-DOA HLA-DPA1 HCG24 HLA-DPB2
esv1006913 Chr.6:33064893 - 33088398 on Build GRCh38 Gain HLA-DPB1 HLA-DPA1
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion PSMB8-AS1 CYP21A1P EGFL8 VPS52 PHF1 LOC100287329 MIR219A1 LST1 NELFE NFKBIL1 GPSM3 LOC102725068 SNORD84 ABHD16A TAPBP C6orf10 VARS HLA-DPA1 TNF VWA7 ZBTB9 PSMB8 SNORD117 HSPA1A PFDN6 SKIV2L MSH5 DAXX CYP21A2 LY6G5C DDAH2 HCG26 HLA-DQB2 C6orf48 C4B MIR6833 LTA C2-AS1 PRRT1 HCG25 TNXA HLA-DQA1 HLA-DPB1 HLA-DOA CFB DDX39B RGL2 CLIC1 LY6G6F B3GALT4 HLA-DOB MCCD1 LY6G6E CSNK2B C4A LY6G6C SNORA38 MIR6873 AGER HLA-DRB6 MICB TNXB MIR6832 BTNL2 GPANK1 KIFC1 HLA-DQB1 DDX39B-AS1 ZBTB22 HSPA1B CUTA BAG6 C2 AGPAT1 SYNGAP1 RNF5 HLA-DRB5 HCG24 SAPCD1 TAP2 MIR1236 ATP6V1G2-DDX39B LTB EHMT2 LY6G5B PSMB9 C6orf25 LSM2 RXRB HCG23 SNORD48 C6orf47 PPP1R2P1 TAP1 MIR3135B BRD2 MIR5004 PPT2-EGFL8 HLA-DRA RING1 DXO COL11A2 LOC101929163 SLC44A4 WDR46 HSPA1L HLA-DMA FKBPL PBX2 ZBTB12 NOTCH4 AIF1 PRRC2A HLA-DRB1 MSH5-SAPCD1 LY6G6D LOC100507547 SNORD52 SAPCD1-AS1 LOC100294145 NCR3 MIR6834 HSD17B8 NEU1 HLA-DMB HLA-DQB1-AS1 RPS18 SLC39A7 APOM STK19 MIR4646 HLA-DQA2 MIR6721 PPT2 HLA-DPB2 ATF6B HCP5 ATP6V1G2
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion PSMB8-AS1 CYP21A1P EGFL8 VPS52 PHF1 LOC100287329 MIR219A1 LST1 NELFE NFKBIL1 GPSM3 LOC102725068 SNORD84 ABHD16A TAPBP C6orf10 VARS HLA-DPA1 TNF VWA7 ZBTB9 PSMB8 SNORD117 HSPA1A PFDN6 SKIV2L MSH5 DAXX CYP21A2 LY6G5C DDAH2 HCG26 HLA-DQB2 C6orf48 C4B MIR6833 LTA C2-AS1 PRRT1 HCG25 TNXA HLA-DQA1 HLA-DPB1 HLA-DOA CFB DDX39B RGL2 CLIC1 LY6G6F B3GALT4 HLA-DOB MCCD1 LY6G6E CSNK2B C4A LY6G6C SNORA38 MIR6873 AGER HLA-DRB6 MICB TNXB MIR6832 BTNL2 GPANK1 KIFC1 HLA-DQB1 DDX39B-AS1 ZBTB22 HSPA1B CUTA BAG6 C2 AGPAT1 SYNGAP1 RNF5 HLA-DRB5 HCG24 SAPCD1 TAP2 MIR1236 ATP6V1G2-DDX39B LTB EHMT2 LY6G5B PSMB9 C6orf25 LSM2 RXRB HCG23 SNORD48 C6orf47 PPP1R2P1 TAP1 MIR3135B BRD2 MIR5004 PPT2-EGFL8 HLA-DRA RING1 DXO COL11A2 LOC101929163 SLC44A4 WDR46 HSPA1L HLA-DMA FKBPL PBX2 ZBTB12 NOTCH4 AIF1 PRRC2A HLA-DRB1 MSH5-SAPCD1 LY6G6D LOC100507547 SNORD52 SAPCD1-AS1 LOC100294145 NCR3 MIR6834 HSD17B8 NEU1 HLA-DMB HLA-DQB1-AS1 RPS18 SLC39A7 APOM STK19 MIR4646 HLA-DQA2 MIR6721 PPT2 HLA-DPB2 ATF6B HCP5 ATP6V1G2
esv22467 Chr.6:33055021 - 33087568 on Build GRCh38 Loss HLA-DPB1 HLA-DPA1
nsv602818 Chr.6:32998165 - 33150041 on Build GRCh38 Loss HLA-DPB1 HLA-DOA HLA-DPA1 HCG24 HLA-DPB2
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion CUTA PSMB8-AS1 HCG25 SYNGAP1 HLA-DQA1 HLA-DPB1 HLA-DOA VPS52 PHF1 RGL2 MIR219A1 B3GALT4 HCG24 HLA-DOB TAPBP TAP2 LOC100294145 MIR6834 HLA-DPA1 HSD17B8 ZBTB9 MIR6873 PSMB9 HLA-DMB PSMB8 HLA-DQB1-AS1 RXRB PFDN6 RPS18 SLC39A7 PPP1R2P1 TAP1 DAXX MIR3135B BRD2 MIR5004 HLA-DQB2 RING1 COL11A2 KIFC1 HLA-DQB1 ZBTB22 HLA-DQA2 HLA-DPB2 WDR46 HLA-DMA

Back To Top

Related Products